CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027175.1-P	Field mustard	cytosol, peroxisome, plasma membrane	79.67	93.78
CDX75874	Canola	plasma membrane	68.29	82.35
AT3G16300.1	Thale cress	cytosol, peroxisome, plasma membrane	69.92	81.13
CDX82409	Canola	cytosol, peroxisome, plasma membrane	52.44	72.88
VIT_09s0002g03780.t01	Wine grape	peroxisome, plastid, vacuole	39.84	46.67
KRH47229	Soybean	cytosol, peroxisome, plasma membrane	37.8	44.71
TraesCS3A01G284900.1	Wheat	plastid	34.96	41.55
TraesCS3B01G318800.1	Wheat	cytosol, plasma membrane, plastid, vacuole	34.55	41.06
TraesCS3D01G284700.1	Wheat	plastid	34.15	40.58
KXG33291	Sorghum	mitochondrion, plasma membrane, plastid, vacuole	33.74	39.34
Solyc03g120870.2.1	Tomato	extracellular, peroxisome, plasma membrane, plastid	32.93	38.94
CDX67924	Canola	nucleus	32.11	38.35
PGSC0003DMT400006497	Potato	plasma membrane	31.3	38.31
Os01t0725400-01	Rice	golgi, plasma membrane, vacuole	31.71	38.24
GSMUA_Achr4P08280_001	Banana	peroxisome, plasma membrane, plastid	33.33	36.77
TraesCS3B01G317700.2	Wheat	plastid	21.54	24.42
CDX79414	Canola	mitochondrion	32.52	22.04

Protein Annotations

EnsemblPlants:CDY30156	EnsemblPlantsGene:GSBRNA2T00044735001	GO:A0A078GXC3	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	InterPro:CASP/CASPL	InterPro:CASP_dom	PANTHER:PTHR11615	PANTHER:PTHR11615:SF118
PFAM:PF04535	ProteinID:CDY30156	ProteinID:CDY30156.1	SEG:seg	TIGRFAMs:TIGR01569	TMHMM:TMhelix
UniParc:UPI0004EDE086	UniProt:A0A078GXC3	MapMan:35.1	:	:	:

Description

BnaC05g37060DCASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXC3]

Coordinates

chrLK032249:-:398771..400001

Molecular Weight (calculated)

27118.0 Da

IEP (calculated)

7.928

GRAVY (calculated)

0.270

Length

246 amino acids

Sequence
(BLAST)

001: MFFGQDSCLV QSDHHWVYLK DTDYMESEKP HGVTGNAMAK ATEQKQNSQT VEVTKLDIRD VITTATTYGE DKRHGGRRND VAMFVLRAMC MAVSAVAVSL
101: MVTARETSMT TLYGFEFQLH AVWSLSDSLI YLVAVSSATV IYSLLQLILS GTRLMRKSPV IPTRTQAWFC FAADQILGYA MVSGGSAALG VTNMNRTGIR
201: HMPLPNFCKS LGFFCDHLAI SVVFALLAFL LLAASSILDV LHLSRN

Best Arabidopsis Sequence Match ( AT3G16300.1 )
(BLAST)

001: MAKAAEQKQN PTVASAEAKL DIRDVVNTAI TYGEDNRHGG GKRNDVAMFV LRAMCMAVST VAVTLMVTAR ETSMTTLYGF EFQLHAVWSL SDSLIYLVVV
101: SSATVLYSLI QLIISGTRLM RKSPVIPTRT QAWFCFVADQ IIGYAMVSGG SAALGVTNMN RTGIRHMPLP NFCKSLGFFC DHLAGSIVFA LFAFLLLAAS
201: SLLDVLHLSR HR

Arabidopsis Description

CASP-like protein 3A1 [Source:UniProtKB/Swiss-Prot;Acc:Q3EB59]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.