Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001627.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 97.74 | 97.74 |
| CDX75874 | Canola | plasma membrane | 75.14 | 65.2 |
| AT3G16300.1 | Thale cress | cytosol, peroxisome, plasma membrane | 71.75 | 59.91 |
| CDY30156 | Canola | cytosol, peroxisome, plasma membrane | 72.88 | 52.44 |
| VIT_09s0002g03780.t01 | Wine grape | peroxisome, plastid, vacuole | 44.07 | 37.14 |
| KRH47229 | Soybean | cytosol, peroxisome, plasma membrane | 40.11 | 34.13 |
| TraesCS3A01G284900.1 | Wheat | plastid | 38.42 | 32.85 |
| Solyc03g120870.2.1 | Tomato | extracellular, peroxisome, plasma membrane, plastid | 38.42 | 32.69 |
| CDX67924 | Canola | nucleus | 37.85 | 32.52 |
| Os01t0725400-01 | Rice | golgi, plasma membrane, vacuole | 37.29 | 32.35 |
| PGSC0003DMT400006497 | Potato | plasma membrane | 36.72 | 32.34 |
| TraesCS3B01G318800.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 37.29 | 31.88 |
| TraesCS3D01G284700.1 | Wheat | plastid | 36.72 | 31.4 |
| GSMUA_Achr4P08280_001 | Banana | peroxisome, plasma membrane, plastid | 39.55 | 31.39 |
| KXG33291 | Sorghum | mitochondrion, plasma membrane, plastid, vacuole | 37.29 | 31.28 |
| TraesCS3B01G317700.2 | Wheat | plastid | 21.47 | 17.51 |
| CDX79414 | Canola | mitochondrion | 35.59 | 17.36 |
Protein Annotations
| EnsemblPlants:CDX82409 | EnsemblPlantsGene:GSBRNA2T00137536001 | GO:A0A078D2D5 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 |
| PANTHER:PTHR11615:SF118 | PFAM:PF04535 | ProteinID:CDX82409 | ProteinID:CDX82409.1 | SEG:seg | TIGRFAMs:TIGR01569 |
| TMHMM:TMhelix | UniParc:UPI0004EE0306 | MapMan:35.1 | : | : | : |
Description
BnaA03g34120D
Coordinates
chrLK031828:+:1088295..1088994
Molecular Weight (calculated)
19397.7 Da
IEP (calculated)
6.894
GRAVY (calculated)
0.460
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKATEQKKN SITVGETKLD IRDVVTTTYD EDNPCETSMT TLYGFEFQLH AVWSLSDSLI YLVVVTSATV IYSLLQLVLS GTRLMRKTHV VPTRTQAWFC
101: FVADQILGCA MVSGGSAALG VTNMNRTGIR HMPLPNFCKS LGFFCDHLAI SVVFALFAFL LLAASSILDV LRLSGDC
101: FVADQILGCA MVSGGSAALG VTNMNRTGIR HMPLPNFCKS LGFFCDHLAI SVVFALFAFL LLAASSILDV LRLSGDC
001: MAKAAEQKQN PTVASAEAKL DIRDVVNTAI TYGEDNRHGG GKRNDVAMFV LRAMCMAVST VAVTLMVTAR ETSMTTLYGF EFQLHAVWSL SDSLIYLVVV
101: SSATVLYSLI QLIISGTRLM RKSPVIPTRT QAWFCFVADQ IIGYAMVSGG SAALGVTNMN RTGIRHMPLP NFCKSLGFFC DHLAGSIVFA LFAFLLLAAS
201: SLLDVLHLSR HR
101: SSATVLYSLI QLIISGTRLM RKSPVIPTRT QAWFCFVADQ IIGYAMVSGG SAALGVTNMN RTGIRHMPLP NFCKSLGFFC DHLAGSIVFA LFAFLLLAAS
201: SLLDVLHLSR HR
Arabidopsis Description
CASP-like protein 3A1 [Source:UniProtKB/Swiss-Prot;Acc:Q3EB59]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.