Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003530.1-P | Field mustard | plasma membrane | 84.47 | 94.05 |
| AT1G79780.1 | Thale cress | plasma membrane | 69.9 | 77.01 |
| CDX79414 | Canola | mitochondrion | 82.52 | 46.83 |
| KRH47229 | Soybean | cytosol, peroxisome, plasma membrane | 43.2 | 42.79 |
| VIT_09s0002g03780.t01 | Wine grape | peroxisome, plastid, vacuole | 39.81 | 39.05 |
| CDX82409 | Canola | cytosol, peroxisome, plasma membrane | 32.52 | 37.85 |
| Os01t0725400-01 | Rice | golgi, plasma membrane, vacuole | 35.92 | 36.27 |
| KXG33291 | Sorghum | mitochondrion, plasma membrane, plastid, vacuole | 35.92 | 35.07 |
| CDX75874 | Canola | plasma membrane | 34.47 | 34.8 |
| PGSC0003DMT400006497 | Potato | plasma membrane | 33.5 | 34.33 |
| TraesCS3B01G318800.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 34.47 | 34.3 |
| GSMUA_Achr4P08280_001 | Banana | peroxisome, plasma membrane, plastid | 36.89 | 34.08 |
| TraesCS3A01G284900.1 | Wheat | plastid | 33.98 | 33.82 |
| TraesCS3D01G284700.1 | Wheat | plastid | 33.98 | 33.82 |
| Solyc03g120870.2.1 | Tomato | extracellular, peroxisome, plasma membrane, plastid | 33.98 | 33.65 |
| CDY30156 | Canola | cytosol, peroxisome, plasma membrane | 38.35 | 32.11 |
| TraesCS3B01G317700.2 | Wheat | plastid | 19.9 | 18.89 |
Protein Annotations
| EnsemblPlants:CDX67924 | EnsemblPlantsGene:GSBRNA2T00099132001 | GO:A0A078BVV8 | InterPro:CASP/CASPL | InterPro:CASP_dom | ncoils:Coil |
| PANTHER:PTHR11615 | PANTHER:PTHR11615:SF118 | PFAM:PF04535 | ProteinID:CDX67924 | ProteinID:CDX67924.1 | SEG:seg |
| TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI0004EE3668 | MapMan:35.1 | : | : |
Description
BnaA07g19640D
Coordinates
chrLK031787:+:2919284..2920881
Molecular Weight (calculated)
22807.1 Da
IEP (calculated)
9.740
GRAVY (calculated)
0.334
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSVYLTSMS REQKKLKRVD RMNRNGEEEV AEKRRRRRRE GVQVSLRGGC LAASATAIAV MLMATEKGVA DIYGLPLPLN SSWSFSPSYQ YVVGACTVTV
101: LYSLLHLCLG IYRLLTGSPI TPSRSQAWLC FIFDQLFSYL IMSAGSAGIG VTNLNKTGIK HTPLPDFCKT LSYFCNHVAL SLLLVLLSFI FLASSSLFNV
201: LVLSTL
101: LYSLLHLCLG IYRLLTGSPI TPSRSQAWLC FIFDQLFSYL IMSAGSAGIG VTNLNKTGIK HTPLPDFCKT LSYFCNHVAL SLLLVLLSFI FLASSSLFNV
201: LVLSTL
001: MTSNGEGGEV VAKRRRKGIK ELVQVALRGG CLAASATAMA VMLTATEEGV ADIYGFKLTL SSNWSFSPSY QYVVGACAGT VLYSLLQLCL GVYRLVTGSP
101: ITPSRFQAWL CFTSDQLFCY LMMSAGSAGS GVTNLNKTGI RHTPLPDFCK TLSSFCNHVA LSLLLVFLSF IFLASSSFFT VLVLSTP
101: ITPSRFQAWL CFTSDQLFCY LMMSAGSAGS GVTNLNKTGI RHTPLPDFCK TLSSFCNHVA LSLLLVFLSF IFLASSSFFT VLVLSTP
Arabidopsis Description
CASP-like protein 3A2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFB8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.