Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003530.1-P | Field mustard | plasma membrane | 46.83 | 91.89 |
| CDX67924 | Canola | nucleus | 46.83 | 82.52 |
| AT1G79780.1 | Thale cress | plasma membrane | 38.02 | 73.8 |
| KRH47229 | Soybean | cytosol, peroxisome, plasma membrane | 24.52 | 42.79 |
| VIT_09s0002g03780.t01 | Wine grape | peroxisome, plastid, vacuole | 22.04 | 38.1 |
| Os01t0725400-01 | Rice | golgi, plasma membrane, vacuole | 20.94 | 37.25 |
| CDX82409 | Canola | cytosol, peroxisome, plasma membrane | 17.36 | 35.59 |
| KXG33291 | Sorghum | mitochondrion, plasma membrane, plastid, vacuole | 20.66 | 35.55 |
| TraesCS3B01G318800.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 20.11 | 35.27 |
| CDX75874 | Canola | plasma membrane | 19.56 | 34.8 |
| GSMUA_Achr4P08280_001 | Banana | peroxisome, plasma membrane, plastid | 20.94 | 34.08 |
| PGSC0003DMT400006497 | Potato | plasma membrane | 18.73 | 33.83 |
| TraesCS3A01G284900.1 | Wheat | plastid | 19.28 | 33.82 |
| TraesCS3D01G284700.1 | Wheat | plastid | 19.28 | 33.82 |
| Solyc03g120870.2.1 | Tomato | extracellular, peroxisome, plasma membrane, plastid | 19.28 | 33.65 |
| CDY30156 | Canola | cytosol, peroxisome, plasma membrane | 22.04 | 32.52 |
| TraesCS3B01G317700.2 | Wheat | plastid | 11.85 | 19.82 |
Protein Annotations
| EnsemblPlants:CDX79414 | EnsemblPlantsGene:GSBRNA2T00132133001 | GO:A0A078CTP3 | InterPro:CASP/CASPL | InterPro:CASP_dom | InterPro:DUF1677_pln |
| PANTHER:PTHR11615 | PANTHER:PTHR11615:SF118 | PFAM:PF04535 | PFAM:PF07911 | ProteinID:CDX79414 | ProteinID:CDX79414.1 |
| SEG:seg | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI0004EEBE82 | MapMan:35.1 | : |
Description
BnaC06g18890D
Coordinates
chrLK031817:-:2019311..2021719
Molecular Weight (calculated)
40338.3 Da
IEP (calculated)
9.520
GRAVY (calculated)
-0.124
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MAANGRRKSV SGSVVKPPPP SKLAQASLHR TLSDISLDFH REEKGLGTIT EVEKAKCECC GMREECTMEY IEKVREKFLG KWICGLCSEA VKEEREKKEE
101: NGLEGALKEH MSACLRFNKL GRKYPALFQA EAMRDMLRKS TRRSQSISPK PMSTIHNKPA ISRTSSLESR KEEVKKVDRM NRNGEEEVAE KKRRRREGVQ
201: VSLRGGCLAA SATAIAVMLM ATEKGVADIY GLPLPLNSSW SFSPSYQYVV GACTVTILYS LFHLCLGIYR LLTGSPITPS RSQAWLCFIF DQLFSYLIMS
301: AGSAGIGVTN LNKTGIKHTP LPDFCKTLSY FCNHVALSLL LVLLSFIFLA SSSLFNVLVL STL
101: NGLEGALKEH MSACLRFNKL GRKYPALFQA EAMRDMLRKS TRRSQSISPK PMSTIHNKPA ISRTSSLESR KEEVKKVDRM NRNGEEEVAE KKRRRREGVQ
201: VSLRGGCLAA SATAIAVMLM ATEKGVADIY GLPLPLNSSW SFSPSYQYVV GACTVTILYS LFHLCLGIYR LLTGSPITPS RSQAWLCFIF DQLFSYLIMS
301: AGSAGIGVTN LNKTGIKHTP LPDFCKTLSY FCNHVALSLL LVLLSFIFLA SSSLFNVLVL STL
001: MTSNGEGGEV VAKRRRKGIK ELVQVALRGG CLAASATAMA VMLTATEEGV ADIYGFKLTL SSNWSFSPSY QYVVGACAGT VLYSLLQLCL GVYRLVTGSP
101: ITPSRFQAWL CFTSDQLFCY LMMSAGSAGS GVTNLNKTGI RHTPLPDFCK TLSSFCNHVA LSLLLVFLSF IFLASSSFFT VLVLSTP
101: ITPSRFQAWL CFTSDQLFCY LMMSAGSAGS GVTNLNKTGI RHTPLPDFCK TLSSFCNHVA LSLLLVFLSF IFLASSSFFT VLVLSTP
Arabidopsis Description
CASP-like protein 3A2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFB8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.