Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027175.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 81.6 | 82.78 |
| CDX75874 | Canola | plasma membrane | 73.11 | 75.98 |
| Bra001627.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 59.91 | 71.75 |
| CDX82409 | Canola | cytosol, peroxisome, plasma membrane | 59.91 | 71.75 |
| CDY30156 | Canola | cytosol, peroxisome, plasma membrane | 81.13 | 69.92 |
| VIT_09s0002g03780.t01 | Wine grape | peroxisome, plastid, vacuole | 45.75 | 46.19 |
| KRH47229 | Soybean | cytosol, peroxisome, plasma membrane | 42.92 | 43.75 |
| AT1G79780.1 | Thale cress | plasma membrane | 37.74 | 42.78 |
| Solyc03g120870.2.1 | Tomato | extracellular, peroxisome, plasma membrane, plastid | 40.09 | 40.87 |
| PGSC0003DMT400006497 | Potato | plasma membrane | 38.68 | 40.8 |
| TraesCS3A01G284900.1 | Wheat | plastid | 38.68 | 39.61 |
| TraesCS3B01G318800.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 38.21 | 39.13 |
| TraesCS3D01G284700.1 | Wheat | plastid | 37.74 | 38.65 |
| Os01t0725400-01 | Rice | golgi, plasma membrane, vacuole | 35.38 | 36.76 |
| KXG33291 | Sorghum | mitochondrion, plasma membrane, plastid, vacuole | 36.32 | 36.49 |
| GSMUA_Achr4P08280_001 | Banana | peroxisome, plasma membrane, plastid | 36.32 | 34.53 |
| TraesCS3B01G317700.2 | Wheat | plastid | 23.58 | 23.04 |
Protein Annotations
| MapMan:35.1 | EntrezGene:820877 | ProteinID:AAB63647.1 | ProteinID:AEE75795.1 | ArrayExpress:AT3G16300 | EnsemblPlantsGene:AT3G16300 |
| RefSeq:AT3G16300 | TAIR:AT3G16300 | RefSeq:AT3G16300-TAIR-G | EnsemblPlants:AT3G16300.1 | TAIR:AT3G16300.1 | ProteinID:BAB01269.1 |
| InterPro:CASP/CASPL | InterPro:CASP_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0051536 | RefSeq:NP_188251.1 |
| PFAM:PF04535 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF118 | UniProt:Q3EB59 | TIGRFAMs:TIGR01569 | TMHMM:TMhelix |
| UniParc:UPI0000163071 | SEG:seg | : | : | : | : |
Description
CASP-like protein 3A1 [Source:UniProtKB/Swiss-Prot;Acc:Q3EB59]
Coordinates
chr3:-:5525322..5526212
Molecular Weight (calculated)
23111.4 Da
IEP (calculated)
9.252
GRAVY (calculated)
0.442
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKAAEQKQN PTVASAEAKL DIRDVVNTAI TYGEDNRHGG GKRNDVAMFV LRAMCMAVST VAVTLMVTAR ETSMTTLYGF EFQLHAVWSL SDSLIYLVVV
101: SSATVLYSLI QLIISGTRLM RKSPVIPTRT QAWFCFVADQ IIGYAMVSGG SAALGVTNMN RTGIRHMPLP NFCKSLGFFC DHLAGSIVFA LFAFLLLAAS
201: SLLDVLHLSR HR
101: SSATVLYSLI QLIISGTRLM RKSPVIPTRT QAWFCFVADQ IIGYAMVSGG SAALGVTNMN RTGIRHMPLP NFCKSLGFFC DHLAGSIVFA LFAFLLLAAS
201: SLLDVLHLSR HR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.