Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- nucleus 2
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX90824 | Canola | mitochondrion, nucleus, plastid | 84.66 | 90.82 |
AT4G12240.1 | Thale cress | mitochondrion | 73.75 | 68.68 |
VIT_02s0241g00170.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 21.53 | 54.89 |
PGSC0003DMT400002602 | Potato | cytosol | 53.1 | 49.86 |
GSMUA_Achr6P03610_001 | Banana | mitochondrion | 48.97 | 48.68 |
KRG97366 | Soybean | mitochondrion | 49.56 | 47.19 |
KRH31550 | Soybean | mitochondrion | 53.98 | 46.56 |
HORVU2Hr1G081060.1 | Barley | cytosol, nucleus | 11.21 | 37.25 |
Zm00001d003392_P001 | Maize | mitochondrion | 30.97 | 31.82 |
Os04t0464600-01 | Rice | mitochondrion | 30.97 | 31.72 |
TraesCS2B01G346300.1 | Wheat | mitochondrion | 30.09 | 31.1 |
TraesCS2A01G335600.1 | Wheat | mitochondrion | 30.09 | 31.0 |
TraesCS2D01G327200.1 | Wheat | nucleus | 29.79 | 30.7 |
CDY32605 | Canola | nucleus | 34.81 | 30.57 |
CDY38889 | Canola | nucleus | 34.51 | 30.15 |
OQU81721 | Sorghum | mitochondrion | 32.15 | 16.87 |
Protein Annotations
EnsemblPlants:CDY21264 | EnsemblPlantsGene:GSBRNA2T00015584001 | Gene3D:3.30.160.60 | GO:A0A078G788 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0005488 | InterPro:IPR013087 | InterPro:NYN_limkain-b1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR35744 |
PANTHER:PTHR35744:SF2 | PFAM:PF01936 | PFscan:PS50157 | ProteinID:CDY21264 | ProteinID:CDY21264.1 | ScanProsite:PS00028 |
SEG:seg | SUPFAM:SSF57667 | UniParc:UPI0004EE789E | UniProt:A0A078G788 | MapMan:15.5.15 | : |
Description
BnaC03g29480DBnaC03g29480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G788]
Coordinates
chrLK032119:+:14010..15182
Molecular Weight (calculated)
38606.9 Da
IEP (calculated)
8.267
GRAVY (calculated)
-0.648
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSRFLHRIR SSKTPITSLN SIKPFTSLNP KPPTRVAVFW DLDNKPPASH PPHDAAVKLR TAASSFGSVK LMVAYANRHA FSYNTGLAKP AEPYFCGVCD
101: RRFYANEKLI AHFRQIHETE NQKRVRQIEA AKGHQRVRLV AKYSMKMEKY KRAARNVLTP KEGYGLADEL KRGGFWVKMV SDKPEAADRA LKEHMVDVMD
201: RREAECLVLV SDDSGFAEVL WEAKERCLRT VVIGDLSEGK LKRVADVAYS WKEVVMGKAK KEVEKVVGKW RDRDVLKKLE WSYDPVLEKE RGFCCGDWDY
301: GFDSDGDDDE VENGAEMGDG GDWWEMDDED GAGSSRPCR
101: RRFYANEKLI AHFRQIHETE NQKRVRQIEA AKGHQRVRLV AKYSMKMEKY KRAARNVLTP KEGYGLADEL KRGGFWVKMV SDKPEAADRA LKEHMVDVMD
201: RREAECLVLV SDDSGFAEVL WEAKERCLRT VVIGDLSEGK LKRVADVAYS WKEVVMGKAK KEVEKVVGKW RDRDVLKKLE WSYDPVLEKE RGFCCGDWDY
301: GFDSDGDDDE VENGAEMGDG GDWWEMDDED GAGSSRPCR
001: MFSRFVLKSW RPKTQTTSLN SIKGFSFSSS SINPKPKIRV GVWWDLDNKP PASFPPYDAA VKLRTAASSF GTVKLMMAYA NRHAFSYVPL EVREQRKDRK
101: LLNKLENKGL VKPPEPYFCG VCDRRFYTNE KLINHFKQIH ETENQKRMRQ IESSKGHRRV RLVAKYSMKI EKYKRAARNV LTPKEGYGLA DELKRAGFWV
201: KMVSDKPDAA DKALKEHLVE VMDKREVECV VLVSDDSDFA GILWEAKERC LRTVVIGDSN EGALKRVADV AYSWKEVTMG KAKKEVEKVV GKWKDRDVLK
301: KLEWTYDPAL EKERGGSCGV WDYEFDYDDE IENGTEVEPV EIGDGVDWWK IDTEDGVGSS RTCR
101: LLNKLENKGL VKPPEPYFCG VCDRRFYTNE KLINHFKQIH ETENQKRMRQ IESSKGHRRV RLVAKYSMKI EKYKRAARNV LTPKEGYGLA DELKRAGFWV
201: KMVSDKPDAA DKALKEHLVE VMDKREVECV VLVSDDSDFA GILWEAKERC LRTVVIGDSN EGALKRVADV AYSWKEVTMG KAKKEVEKVV GKWKDRDVLK
301: KLEWTYDPAL EKERGGSCGV WDYEFDYDDE IENGTEVEPV EIGDGVDWWK IDTEDGVGSS RTCR
Arabidopsis Description
Uncharacterized protein AT4g12240 [Source:UniProtKB/TrEMBL;Acc:Q9STI7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.