Factsheet for TraesCS2A01G335600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G327200.1	Wheat	nucleus	96.96	96.96
TraesCS2B01G346300.1	Wheat	mitochondrion	94.53	94.82
HORVU2Hr1G081060.1	Barley	cytosol, nucleus	29.18	94.12
Os04t0464600-01	Rice	mitochondrion	71.12	70.69
Zm00001d003392_P001	Maize	mitochondrion	65.35	65.15
GSMUA_Achr6P03610_001	Banana	mitochondrion	36.78	35.48
OQU81721	Sorghum	mitochondrion	66.57	33.9
CDX90824	Canola	mitochondrion, nucleus, plastid	31.61	32.91
CDY21264	Canola	mitochondrion, nucleus, plastid	31.0	30.09
Bra000767.1-P	Field mustard	mitochondrion	31.91	29.58
VIT_02s0241g00170.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	11.25	27.82
AT4G12240.1	Thale cress	mitochondrion	30.7	27.75
KRG97366	Soybean	mitochondrion	29.48	27.25
PGSC0003DMT400002602	Potato	cytosol	27.96	25.48
KRH31550	Soybean	mitochondrion	30.4	25.45
TraesCS7A01G128700.1	Wheat	nucleus, plastid	23.71	19.07

Protein Annotations

EnsemblPlants:TraesCS2A01G335600.1	EnsemblPlantsGene:TraesCS2A01G335600	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	InterPro:IPR013087
InterPro:Znf_C2H2_type	PANTHER:PTHR35744	PANTHER:PTHR35744:SF2	PFscan:PS50157	ScanProsite:PS00028	SEG:seg
TIGR:cd06167	MapMan:15.5.15	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:569365082..569366071

Molecular Weight (calculated)

36335.9 Da

IEP (calculated)

9.233

GRAVY (calculated)

-0.538

Length

329 amino acids

Sequence
(BLAST)

001: MSRPLYNLRR RLLASTLRVL PSPSHRLSTT TSTPATRAPT TPVAVLWDLA ASRPPSKHPL YDSAVRLHLA ASSFGRLRFS AAFLHPCHRL PDPDPSADAT
101: NLCRVCGRKF RARDALLRHF DTIHTREHAK RLERIESSRG DRRVRLAASL SFKLSKYTKA ARELTAGVNP GSPADELRRA GVHAELSRYP STALRDRAQE
201: VLDDGSVGCL LLVSGREELS PLLRLAKEKG VRSVVVGGES GLARWADTGF TWAEVIAGKA RKAAPSMSGK WRDRDVLKGL EWRYEDDDEE DVMFEEDGDG
301: DGSEELAGSA NGKPWWKLES DGEDSSLCT

Best Arabidopsis Sequence Match ( AT4G12240.1 )
(BLAST)

001: MFSRFVLKSW RPKTQTTSLN SIKGFSFSSS SINPKPKIRV GVWWDLDNKP PASFPPYDAA VKLRTAASSF GTVKLMMAYA NRHAFSYVPL EVREQRKDRK
101: LLNKLENKGL VKPPEPYFCG VCDRRFYTNE KLINHFKQIH ETENQKRMRQ IESSKGHRRV RLVAKYSMKI EKYKRAARNV LTPKEGYGLA DELKRAGFWV
201: KMVSDKPDAA DKALKEHLVE VMDKREVECV VLVSDDSDFA GILWEAKERC LRTVVIGDSN EGALKRVADV AYSWKEVTMG KAKKEVEKVV GKWKDRDVLK
301: KLEWTYDPAL EKERGGSCGV WDYEFDYDDE IENGTEVEPV EIGDGVDWWK IDTEDGVGSS RTCR

Arabidopsis Description

Uncharacterized protein AT4g12240 [Source:UniProtKB/TrEMBL;Acc:Q9STI7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.