Factsheet for Os04t0464600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G081060.1	Barley	cytosol, nucleus	25.08	81.37
TraesCS2D01G327200.1	Wheat	nucleus	73.11	73.56
Zm00001d003392_P001	Maize	mitochondrion	71.6	71.82
TraesCS2B01G346300.1	Wheat	mitochondrion	70.69	71.34
TraesCS2A01G335600.1	Wheat	mitochondrion	70.69	71.12
GSMUA_Achr6P03610_001	Banana	mitochondrion	38.67	37.54
OQU81721	Sorghum	mitochondrion	71.6	36.69
CDX90824	Canola	mitochondrion, nucleus, plastid	32.33	33.86
CDY21264	Canola	mitochondrion, nucleus, plastid	31.72	30.97
Bra000767.1-P	Field mustard	mitochondrion	32.63	30.42
VIT_02s0241g00170.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	11.78	29.32
AT4G12240.1	Thale cress	mitochondrion	31.12	28.3
KRG97366	Soybean	mitochondrion	29.0	26.97
PGSC0003DMT400002602	Potato	cytosol	29.31	26.87
KRH31550	Soybean	mitochondrion	28.4	23.92
Os06t0166200-01	Rice	plastid	23.87	19.27

Protein Annotations

MapMan:15.5.15	EntrezGene:4336084	ProteinID:BAF14933.1	ProteinID:BAS89588.1	ProteinID:CAE04360.1	ProteinID:CAE04822.1
ncoils:Coil	ProteinID:EAZ31009.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	InterPro:IPR013087	EnsemblPlantsGene:Os04g0464600
EnsemblPlants:Os04t0464600-01	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR35744	PANTHER:PTHR35744:SF2	UniProt:Q7X666
UniParc:UPI00001B17D0	RefSeq:XP_015636930.1	InterPro:Znf_C2H2_type	SEG:seg	:	:

Description

Zinc finger, C2H2-type domain containing protein. (Os04t0464600-01)

Coordinates

chr4:+:23190942..23192204

Molecular Weight (calculated)

36356.3 Da

IEP (calculated)

10.315

GRAVY (calculated)

-0.346

Length

331 amino acids

Sequence
(BLAST)

001: MFPPFSHLRR RLLAAIPNPN LLLRPSRSLS TSTTPATRAP ATPVAVLWDL AASRPPSTLP LYDAAVRLHL AATSFGRVRL SAAFVHPGHR LPAPSPSAAA
101: AAVHLCRVCG RRFRARDTLL RHFDAIHARE HAKRLARIDS SRGDRRVRLA AALSLKLSKY EKAARELTAA ADPCSPADDL RRARVAVELS PTPSVSLLER
201: AHEVLDGGSV RCLMLVSARD ELAPLLRLAR EKGVRSVVVG GESGPARWAD VGFSWAEVIA GKARKAAPSV SGKWRDRDVL KRLEWRYDDD DEEVVFEEDG
301: DEDGIDELTR NSKGKPWWKL ESDGEDSSAC R

Best Arabidopsis Sequence Match ( AT4G12240.1 )
(BLAST)

001: MFSRFVLKSW RPKTQTTSLN SIKGFSFSSS SINPKPKIRV GVWWDLDNKP PASFPPYDAA VKLRTAASSF GTVKLMMAYA NRHAFSYVPL EVREQRKDRK
101: LLNKLENKGL VKPPEPYFCG VCDRRFYTNE KLINHFKQIH ETENQKRMRQ IESSKGHRRV RLVAKYSMKI EKYKRAARNV LTPKEGYGLA DELKRAGFWV
201: KMVSDKPDAA DKALKEHLVE VMDKREVECV VLVSDDSDFA GILWEAKERC LRTVVIGDSN EGALKRVADV AYSWKEVTMG KAKKEVEKVV GKWKDRDVLK
301: KLEWTYDPAL EKERGGSCGV WDYEFDYDDE IENGTEVEPV EIGDGVDWWK IDTEDGVGSS RTCR

Arabidopsis Description

Uncharacterized protein AT4g12240 [Source:UniProtKB/TrEMBL;Acc:Q9STI7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.