CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97366	Soybean	mitochondrion	76.84	84.83
VIT_02s0241g00170.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	22.14	65.41
PGSC0003DMT400002602	Potato	cytosol	52.16	56.79
AT4G12240.1	Thale cress	mitochondrion	52.42	56.59
CDX90824	Canola	mitochondrion, nucleus, plastid	44.78	55.7
Bra000767.1-P	Field mustard	mitochondrion	48.85	54.08
CDY21264	Canola	mitochondrion, nucleus, plastid	46.56	53.98
GSMUA_Achr6P03610_001	Banana	mitochondrion	43.26	49.85
KRH15394	Soybean	nucleus	30.53	36.04
HORVU2Hr1G081060.1	Barley	cytosol, nucleus	9.16	35.29
KRH05651	Soybean	nucleus	30.79	31.84
TraesCS2D01G327200.1	Wheat	nucleus	25.7	30.7
TraesCS2B01G346300.1	Wheat	mitochondrion	25.45	30.49
TraesCS2A01G335600.1	Wheat	mitochondrion	25.45	30.4
Zm00001d003392_P001	Maize	mitochondrion	24.43	29.09
Os04t0464600-01	Rice	mitochondrion	23.92	28.4
OQU81721	Sorghum	mitochondrion	26.21	15.94

Protein Annotations

EntrezGene:100785257	MapMan:15.5.15	Gene3D:3.30.160.60	EMBL:ACUP02007146	EnsemblPlantsGene:GLYMA_11G253400	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	UniProt:K7LRY3	EnsemblPlants:KRH31550	ProteinID:KRH31550
ProteinID:KRH31550.1	InterPro:NYN_limkain-b1	PFAM:PF01936	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR35744
PANTHER:PTHR35744:SF2	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000233D270	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:34415863..34417668

Molecular Weight (calculated)

45349.6 Da

IEP (calculated)

8.433

GRAVY (calculated)

-0.691

Length

393 amino acids

Sequence
(BLAST)

001: MVSYTSYFIY RRAENPLQIL KFRSIFFFSL EATCWQTYGT LRHCHSGSER GKNQKLTNRV GLFWDLDNKP PNSIPPYEVA NKLRIAASSF GVVRYMVAYA
101: NSHTFSHVPQ GVRESRKEKE LLYRLENKGV IKPNQPYRCK VCGRKFYTND KLVNHFKQLH ESEHTKRMNQ IESARGSRRV KLVAKYSMKM EKYKKAASDI
201: LTPKVGYGLA DELKRAGFWV RTVSDKPQAA DQALQSHIVD IMDHRRVECV VLVSDDSDFV DVINEAKMRC LKTVVIGDID EGFLKRTADT AFSWEEILMG
301: KAKKQAVSVV KNWKDRDILK KLEWTYNPDE DKSNFNLDDT VTEASEDDNI EDTTCDEVDD AYKDDRGSWW ELDSDDDATN RQSGKLSGLS VNR

Best Arabidopsis Sequence Match ( AT4G12240.1 )
(BLAST)

001: MFSRFVLKSW RPKTQTTSLN SIKGFSFSSS SINPKPKIRV GVWWDLDNKP PASFPPYDAA VKLRTAASSF GTVKLMMAYA NRHAFSYVPL EVREQRKDRK
101: LLNKLENKGL VKPPEPYFCG VCDRRFYTNE KLINHFKQIH ETENQKRMRQ IESSKGHRRV RLVAKYSMKI EKYKRAARNV LTPKEGYGLA DELKRAGFWV
201: KMVSDKPDAA DKALKEHLVE VMDKREVECV VLVSDDSDFA GILWEAKERC LRTVVIGDSN EGALKRVADV AYSWKEVTMG KAKKEVEKVV GKWKDRDVLK
301: KLEWTYDPAL EKERGGSCGV WDYEFDYDDE IENGTEVEPV EIGDGVDWWK IDTEDGVGSS RTCR

Arabidopsis Description

Uncharacterized protein AT4g12240 [Source:UniProtKB/TrEMBL;Acc:Q9STI7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.