Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G335600.1 | Wheat | mitochondrion | 94.12 | 29.18 |
| TraesCS2D01G327200.1 | Wheat | nucleus | 94.12 | 29.18 |
| TraesCS2B01G346300.1 | Wheat | mitochondrion | 89.22 | 27.74 |
| Os04t0464600-01 | Rice | mitochondrion | 81.37 | 25.08 |
| Zm00001d003392_P001 | Maize | mitochondrion | 73.53 | 22.73 |
| GSMUA_Achr6P03610_001 | Banana | mitochondrion | 42.16 | 12.61 |
| OQU81721 | Sorghum | mitochondrion | 79.41 | 12.54 |
| CDX90824 | Canola | mitochondrion, nucleus, plastid | 38.24 | 12.34 |
| CDY21264 | Canola | mitochondrion, nucleus, plastid | 37.25 | 11.21 |
| Bra000767.1-P | Field mustard | mitochondrion | 37.25 | 10.7 |
| PGSC0003DMT400002602 | Potato | cytosol | 37.25 | 10.53 |
| AT4G12240.1 | Thale cress | mitochondrion | 36.27 | 10.16 |
| KRH31550 | Soybean | mitochondrion | 35.29 | 9.16 |
| KRG97366 | Soybean | mitochondrion | 30.39 | 8.71 |
| VIT_02s0241g00170.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G081060.1 | EnsemblPlantsGene:HORVU2Hr1G081060 | PANTHER:PTHR35744 | PANTHER:PTHR35744:SF2 | SEG:seg | UniParc:UPI000B465B54 |
| UniProt:A0A287IM16 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:587891009..587891705
Molecular Weight (calculated)
11149.6 Da
IEP (calculated)
4.181
GRAVY (calculated)
-0.873
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: EKGVRSVVVG GESGLARWAD TGFTWAEVIA GKARKAAPSM SGKWRDRDVL KRLEWRYEGD EEEDVVFEED GDGDGSEELA GGANGKPWWK LESDGEDSSP
101: CT
101: CT
001: MFSRFVLKSW RPKTQTTSLN SIKGFSFSSS SINPKPKIRV GVWWDLDNKP PASFPPYDAA VKLRTAASSF GTVKLMMAYA NRHAFSYVPL EVREQRKDRK
101: LLNKLENKGL VKPPEPYFCG VCDRRFYTNE KLINHFKQIH ETENQKRMRQ IESSKGHRRV RLVAKYSMKI EKYKRAARNV LTPKEGYGLA DELKRAGFWV
201: KMVSDKPDAA DKALKEHLVE VMDKREVECV VLVSDDSDFA GILWEAKERC LRTVVIGDSN EGALKRVADV AYSWKEVTMG KAKKEVEKVV GKWKDRDVLK
301: KLEWTYDPAL EKERGGSCGV WDYEFDYDDE IENGTEVEPV EIGDGVDWWK IDTEDGVGSS RTCR
101: LLNKLENKGL VKPPEPYFCG VCDRRFYTNE KLINHFKQIH ETENQKRMRQ IESSKGHRRV RLVAKYSMKI EKYKRAARNV LTPKEGYGLA DELKRAGFWV
201: KMVSDKPDAA DKALKEHLVE VMDKREVECV VLVSDDSDFA GILWEAKERC LRTVVIGDSN EGALKRVADV AYSWKEVTMG KAKKEVEKVV GKWKDRDVLK
301: KLEWTYDPAL EKERGGSCGV WDYEFDYDDE IENGTEVEPV EIGDGVDWWK IDTEDGVGSS RTCR
Arabidopsis Description
Uncharacterized protein AT4g12240 [Source:UniProtKB/TrEMBL;Acc:Q9STI7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.