CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033228_P002	Maize	mitochondrion	98.08	94.26
TraesCS5D01G384500.1	Wheat	mitochondrion	91.68	90.91
TraesCS5B01G376900.1	Wheat	mitochondrion	90.19	90.38
Os03t0643300-02	Rice	mitochondrion	91.04	90.27
TraesCS5A01G375000.1	Wheat	mitochondrion	90.41	89.83
HORVU5Hr1G092960.5	Barley	cytosol	84.44	83.72
GSMUA_Achr10P...	Banana	mitochondrion	79.32	78.48
Solyc08g048450.2.1	Tomato	cytosol, plastid	66.74	73.65
PGSC0003DMT400076803	Potato	cytosol, extracellular, mitochondrion	37.95	71.49
VIT_10s0003g03870.t01	Wine grape	mitochondrion	69.94	70.39
Bra025033.1-P	Field mustard	mitochondrion	70.15	68.97
AT5G46180.1	Thale cress	mitochondrion	68.87	68.0
CDY33459	Canola	mitochondrion	60.98	66.98
CDX77642	Canola	mitochondrion	60.77	66.9
KRH58670	Soybean	mitochondrion	66.52	66.52
KRH42566	Soybean	mitochondrion	65.88	66.17
KRH45041	Soybean	extracellular, mitochondrion	20.68	65.1
KRH04754	Soybean	cytosol	18.12	62.5
Bra017570.1-P	Field mustard	mitochondrion	37.95	61.38
CDY35151	Canola	mitochondrion	47.97	59.06
CDY03236	Canola	cytosol	40.94	49.87
EES17651	Sorghum	plastid	26.87	27.04
EER94889	Sorghum	mitochondrion	26.23	26.45
EES19688	Sorghum	mitochondrion	26.01	25.47
KXG40078	Sorghum	mitochondrion	24.31	23.8
KXG22248	Sorghum	plastid	23.24	23.04
EES14702	Sorghum	mitochondrion	24.95	22.99
EES11419	Sorghum	mitochondrion	24.31	22.31

Protein Annotations

KEGG:00330+2.6.1.13	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.1.1.4.2.2	EntrezGene:8062211	InterPro:Aminotrans_3
UniProt:C5WR74	ncoils:Coil	EnsemblPlants:EER91172	ProteinID:EER91172	ProteinID:EER91172.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004587	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006561	GO:GO:0006593	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0008483	GO:GO:0009056
GO:GO:0009058	GO:GO:0009408	GO:GO:0009413	GO:GO:0009414	GO:GO:0009605	GO:GO:0009607
GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009733	GO:GO:0009737	GO:GO:0009741
GO:GO:0009753	GO:GO:0009816	GO:GO:0009987	GO:GO:0016740	GO:GO:0019544	GO:GO:0030170
GO:GO:0042538	GO:GO:0042802	GO:GO:0051646	InterPro:IPR015421	InterPro:IPR015422	InterPro:Orn_aminotrans
InterPro:Orn_aminotrans_mito	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF18
MetaCyc:PWY-3341	MetaCyc:PWY-4981	MetaCyc:PWY-6344	MetaCyc:PWY-6922	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	EnsemblPlantsGene:SORBI_3001G156100	SUPFAM:SSF53383	unigene:Sbi.501	TIGRFAMs:TIGR01885	UniParc:UPI0001A820AB
RefSeq:XP_002464174.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:12626992..12632862

Molecular Weight (calculated)

51130.0 Da

IEP (calculated)

7.257

GRAVY (calculated)

-0.144

Length

469 amino acids

Sequence
(BLAST)

001: MATALARRGA AALARWRGMC SSSAAAGRAA ALSSEELMRM ERDCSAHNYH PIPMVFSKGE GSHIVDPEGN KYIDFLSAYS AVNQGHCHPK VLRALIEQAE
101: RLTLSSRAFY NDKFPIFAEY LTSMFGYDMM LPMNTGAEGV ETAIKLARKW GYEKKRIPKN EALLVSCCGC FHGRTLGVIS MSCDNDATRG FGPLVPGHLK
201: VDFGDIDGLK KIFEEHGDRI CGFLFEPIQG EAGVVIPPDG YLKGVRDLCS KHNILMIADE IQTGIARTGK MLACDWENIR PDMVILGKAL GAGVVPVSAV
301: LADKDVMLCI RPGEHGSTFG GNPLASAVAV ASLKVVRDEG LVERAAKLGQ EFRDQLQKVQ QKFPQIIREV RGRGLLNAVD LNNDALSPAS AYDICIKLKE
401: RGILAKPTHD TIIRLAPPLS ISPEELAEAS KALSDVLEHD LPQLQKQIKK PESEAEKPVC DRCGRDLYG

Best Arabidopsis Sequence Match ( AT5G46180.1 )
(BLAST)

001: MAATTRRLLY YVSKRFSTAG VRRSYGGLPQ SNSKSPPSSS QRLMELESEF SAHNYHPVPV VFSRANGSTI WDPEGKRYID FLAAYSAVNQ GHCHPKIMKA
101: LQEQVEKLTL SSRAFYNDKF PVFAERLTNM FGYDMVLPMN TGAEGVETAL KLARKWGHEK KNIPKDEAII VSCCGCFHGR TLAIVSMSCD NDATRGFGPL
201: LPGNLKVDFG DADSLEKIFK EKGDRIAGFL FEPIQGEAGV IIPPDGYLKA VRELCTKYNV LMIADEVQSG LARSGKMLAC DWEEIRPDMV ILGKALGGGV
301: IPVSAVLADK DVMLHIKPGQ HGSTFGGNPL ASAVAMASLD VIVEEKLVER SASLGEELRI QLNEIKKQFP KYIKEVRGRG LFNAIEFNSE SLSPVSAYDI
401: CLSLKERGVL AKPTHNTIVR LTPPLSISSD ELRDGSEALH DVLELDLPNL LKINSGKTPV SHITECDRCG RNLYA

Arabidopsis Description

DELTA-OATOrnithine aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.