CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035443_P001	Maize	plastid	89.7	84.44
Os05t0129100-00	Rice	plastid	54.08	77.3
TraesCS1A01G072200.1	Wheat	plastid	75.54	77.02
TraesCS1D01G074600.1	Wheat	plastid	75.97	76.96
Os07t0461900-01	Rice	plastid	53.86	76.52
TraesCS1B01G090600.1	Wheat	plastid	75.54	76.52
HORVU1Hr1G015560.5	Barley	plastid	75.97	69.14
GSMUA_Achr11P...	Banana	cytosol	54.08	68.66
GSMUA_Achr9P04450_001	Banana	cytosol	58.37	67.83
PGSC0003DMT400058543	Potato	cytosol, plastid	61.8	63.02
VIT_09s0002g08670.t01	Wine grape	plastid	61.59	61.99
Solyc08g080370.2.1	Tomato	plastid	61.16	61.96
KRH48868	Soybean	nucleus	61.37	61.24
KRH35638	Soybean	cytosol	60.52	60.91
GSMUA_Achr5P28220_001	Banana	cytosol	31.76	60.91
CDY67620	Canola	mitochondrion, plastid	57.94	60.27
CDY37615	Canola	mitochondrion	57.73	60.04
VIT_19s0027g01790.t01	Wine grape	plastid	60.09	59.96
Bra035168.1-P	Field mustard	mitochondrion	57.94	59.87
Bra008453.1-P	Field mustard	plastid	57.51	59.82
CDX87325	Canola	mitochondrion	57.51	59.42
CDY39963	Canola	mitochondrion	57.51	59.42
AT1G80600.1	Thale cress	plastid	57.51	58.64
CDY68670	Canola	cytosol	43.99	45.96
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	44.21	42.13
EER94889	Sorghum	mitochondrion	27.04	27.1
EER91172	Sorghum	mitochondrion	27.04	26.87
EES19688	Sorghum	mitochondrion	27.04	26.3
KXG40078	Sorghum	mitochondrion	25.75	25.05
EES14702	Sorghum	mitochondrion	23.61	21.61
KXG22248	Sorghum	plastid	21.67	21.35
EES11419	Sorghum	mitochondrion	22.75	20.74

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.1.1.1.4	EntrezGene:8071270	InterPro:AcOrn/SuccOrn_fam	InterPro:Aminotrans_3
UniProt:C5YZF8	EnsemblPlants:EES17651	ProteinID:EES17651	ProteinID:EES17651.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003992	GO:GO:0005488	GO:GO:0005507	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006525	GO:GO:0006526	GO:GO:0006950	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058	GO:GO:0009536	GO:GO:0009570
GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	GO:GO:0042742
GO:GO:0042802	GO:GO:0044419	GO:GO:0080022	InterPro:IPR015421	InterPro:IPR015422	HAMAP:MF_01107
PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF79	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	EnsemblPlantsGene:SORBI_3009G029700	SUPFAM:SSF53383	TIGRFAMs:TIGR00707	UniParc:UPI0001A88E02
RefSeq:XP_002439221.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:2659002..2662104

Molecular Weight (calculated)

49360.3 Da

IEP (calculated)

6.428

GRAVY (calculated)

0.091

Length

466 amino acids

Sequence
(BLAST)

001: MTSLQSFLAI KPAAAGWAAG ARPAAAPQSR RARVSACLAA PPPPPTTAAS AVGPARRELS AASRAVMDDE ARYLVGTYKR SRVVFEYGRG CKLYDVDGRE
101: YLDMSAGIAV TALGHADPDV CATIAEQSGK IVHVSNVFYT TPQVELAKRL VEVSFADRAF FASTGTEANE AAIKFSRKFQ RVAHPDSDDP PMEFLAFSSS
201: FHGRTMGAVA LTSKSQYREP FAPVMPGVTF VDYGDLEAAK KFIQSGRVAA VFVEPVQGEG GIHSATQEFL QGLREACDEA GALLVFDEVQ CGFGRTGYLW
301: AHEAYGVEPD IMTLAKPLAN GIPIGVVLVK EKVAAAINYG DHGTTFGGGP LACQTAITVF DKIMKPGFLA EVSKKGENFK QLLRTKLSGN PHVKEVRGVG
401: LLVGIELDVP AGPLVDACLD AGVIVLTAGK GNVVRLVPPL IISEKELEHA ADVIRDCLPV LDVAAA

Best Arabidopsis Sequence Match ( AT1G80600.1 )
(BLAST)

001: MASLSQITLP RAPSSEIGLL RRRLERPIIR TRIGFNGRIA SVLTNAGDQA VSVKASVSQK VIEEEAKVIV GTYARAPVVL SSGKGCKLFD PEGKEYLDCA
101: SGIAVNALGH GDPDWLRAVT EQAGVLAHVS NVYYTIPQIE LAKRLVASSF ADRVFFCNSG TEANEAAIKF SRKFQRFTHP EDKEVATGFI AFTNSFHGRT
201: LGALALTSKE QYRTPFEPIM PGVTFLEYGN IQAATDLIRS GKIAAVFVEP IQGEGGIYSA TKEFLQSLRS ACDAAGSLLV FDEVQCGLGR TGLMWAYEAF
301: GVTPDIMTVA KPLAGGLPIG AVLVTEKVAE TINYGDHGST FAGSPLVCSA AIAVMDKVSK PSFLSSVSNK GRYFRDLLVK KLGGNSHVKE VRGEGLIIGV
401: ELDVPASSLV DACRDSGLLI LTAGKGNVVR IVPPLVISEE EIERAVEIMS QNLTALD

Arabidopsis Description

WIN1Acetylornithine aminotransferase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.