Factsheet for Bra035168.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87325	Canola	mitochondrion	98.23	98.23
CDY39963	Canola	mitochondrion	96.9	96.9
Bra008453.1-P	Field mustard	plastid	91.8	92.41
AT1G80600.1	Thale cress	plastid	90.69	89.5
GSMUA_Achr11P...	Banana	cytosol	59.42	73.02
GSMUA_Achr9P04450_001	Banana	cytosol	64.3	72.32
VIT_09s0002g08670.t01	Wine grape	plastid	70.95	69.11
PGSC0003DMT400058543	Potato	cytosol, plastid	68.96	68.05
Solyc08g080370.2.1	Tomato	plastid	69.18	67.83
KRH48868	Soybean	nucleus	70.07	67.67
KRH35638	Soybean	cytosol	68.29	66.52
Os05t0129100-00	Rice	plastid	47.89	66.26
GSMUA_Achr5P28220_001	Banana	cytosol	35.26	65.43
VIT_19s0027g01790.t01	Wine grape	plastid	67.18	64.88
Os07t0461900-01	Rice	plastid	47.01	64.63
TraesCS1A01G072200.1	Wheat	plastid	62.08	61.27
TraesCS1B01G090600.1	Wheat	plastid	62.08	60.87
TraesCS1D01G074600.1	Wheat	plastid	61.86	60.65
EES17651	Sorghum	plastid	59.87	57.94
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	62.08	57.26
HORVU1Hr1G015560.5	Barley	plastid	62.53	55.08
Zm00001d035443_P001	Maize	plastid	60.09	54.75
Bra025033.1-P	Field mustard	mitochondrion	29.93	28.3
Bra017570.1-P	Field mustard	mitochondrion	17.07	26.55
Bra017119.1-P	Field mustard	mitochondrion	27.49	25.89
Bra000060.1-P	Field mustard	mitochondrion	27.05	25.63
Bra005111.1-P	Field mustard	mitochondrion	26.83	25.53
Bra011843.1-P	Field mustard	mitochondrion	26.61	25.21
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	24.17	23.8
Bra023845.1-P	Field mustard	mitochondrion	25.94	23.35
Bra031332.1-P	Field mustard	mitochondrion	25.5	23.0
Bra031335.1-P	Field mustard	mitochondrion	25.5	22.91
Bra035836.1-P	Field mustard	plastid	22.62	21.56
Bra038646.1-P	Field mustard	plastid	22.39	21.35
Bra031334.1-P	Field mustard	cytosol	7.1	15.17
Bra010671.1-P	Field mustard	mitochondrion	27.05	13.86

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.1.1.1.4	InterPro:AcOrn/SuccOrn_fam	InterPro:Aminotrans_3	EnsemblPlantsGene:Bra035168
EnsemblPlants:Bra035168.1	EnsemblPlants:Bra035168.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006525
GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009987	GO:GO:0016740	GO:GO:0030170
InterPro:IPR015421	InterPro:IPR015422	UniProt:M4F271	HAMAP:MF_01107	PFAM:PF00202	PIRSF:PIRSF000521
ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF79	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	TIGRFAMs:TIGR00707	UniParc:UPI0002541E30	SEG:seg	:	:

Description

AT1G80600 (E=3e-206) WIN1 | WIN1 (HOPW1-1-INTERACTING 1); N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase/ catalytic/ pyridoxal phosphate binding / transaminase

Coordinates

chrA07:+:22433197..22434720

Molecular Weight (calculated)

48065.1 Da

IEP (calculated)

6.779

GRAVY (calculated)

0.188

Length

451 amino acids

Sequence
(BLAST)

001: MASLGQITLP RAPSLEMSLL RRRFDRPIRT RIGFNGRIVS AQAQVSVKAS VSQKVIEEEA RVLVGTYARA PVVLSSGKGC KLIDAEGKEY LDCASGIAVN
101: ALGHGDPDWL QAVTDQAAVL AHVSNVYYTI PQIELAKRLV ASSFADRVFF CNSGTEANEA AIKFSRKFQR YTHPEDKEVA TGFIAFTNSF HGRTLGALAL
201: TSKEQYRAPF EPIMPGVTFL EYGNVQAATD LISSGKIAAV FVEPIQGEGG VYSATKEFLQ SLRSACDASG ALLVFDEVQC GLGRTGSLWA YEAFGVTPDI
301: MTVAKPLAGG LPIGAVLVTE KVAETIKYGD HGSTFAGNPL VCSAAIAVVD KVSKPSFLAS VSSKGIYFKE LLVKKLGGNS HVKEVRGEGL IIGVELDVPA
401: SPLVDACRDS GLLILTAGKG NVVRIVPPLI ILEEEIERAV EIIFQNLTAL G

Best Arabidopsis Sequence Match ( AT1G80600.1 )
(BLAST)

001: MASLSQITLP RAPSSEIGLL RRRLERPIIR TRIGFNGRIA SVLTNAGDQA VSVKASVSQK VIEEEAKVIV GTYARAPVVL SSGKGCKLFD PEGKEYLDCA
101: SGIAVNALGH GDPDWLRAVT EQAGVLAHVS NVYYTIPQIE LAKRLVASSF ADRVFFCNSG TEANEAAIKF SRKFQRFTHP EDKEVATGFI AFTNSFHGRT
201: LGALALTSKE QYRTPFEPIM PGVTFLEYGN IQAATDLIRS GKIAAVFVEP IQGEGGIYSA TKEFLQSLRS ACDAAGSLLV FDEVQCGLGR TGLMWAYEAF
301: GVTPDIMTVA KPLAGGLPIG AVLVTEKVAE TINYGDHGST FAGSPLVCSA AIAVMDKVSK PSFLSSVSNK GRYFRDLLVK KLGGNSHVKE VRGEGLIIGV
401: ELDVPASSLV DACRDSGLLI LTAGKGNVVR IVPPLVISEE EIERAVEIMS QNLTALD

Arabidopsis Description

WIN1Acetylornithine aminotransferase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.