Factsheet for Bra000060.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66720	Canola	mitochondrion	97.69	94.51
CDY14465	Canola	cytosol	82.14	92.0
Bra017119.1-P	Field mustard	mitochondrion	88.45	87.89
Bra005111.1-P	Field mustard	mitochondrion	86.76	87.13
AT2G38400.2	Thale cress	mitochondrion	89.5	86.41
GSMUA_Achr5P08560_001	Banana	peroxisome	69.75	76.15
Os05t0475400-02	Rice	peroxisome	61.55	74.94
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	74.37	74.21
GSMUA_Achr8P17090_001	Banana	peroxisome	67.23	71.59
VIT_06s0004g07660.t01	Wine grape	mitochondrion	71.85	71.55
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	71.64	71.34
EES19688	Sorghum	mitochondrion	71.01	70.56
Solyc10g076250.1.1	Tomato	mitochondrion	70.59	70.29
TraesCS1D01G292100.1	Wheat	mitochondrion	70.38	70.23
KRH76075	Soybean	mitochondrion	69.96	70.11
TraesCS1B01G308900.1	Wheat	mitochondrion	70.17	70.02
GSMUA_Achr6P32610_001	Banana	mitochondrion	69.75	69.75
TraesCS1A01G299100.1	Wheat	mitochondrion	69.75	69.6
Zm00001d038460_P007	Maize	plasma membrane	68.28	69.3
EER94889	Sorghum	mitochondrion	67.44	69.03
KRH65497	Soybean	mitochondrion	68.7	68.84
KRH00394	Soybean	mitochondrion	69.33	68.46
TraesCS4A01G137000.1	Wheat	mitochondrion	65.97	68.41
TraesCS4B01G167100.1	Wheat	mitochondrion	65.76	68.19
TraesCS4D01G170300.1	Wheat	mitochondrion	65.76	68.19
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	65.34	67.9
HORVU1Hr1G070220.2	Barley	mitochondrion	69.75	67.21
Os03t0338000-01	Rice	peroxisome	67.65	66.53
Zm00001d038453_P003	Maize	mitochondrion	69.96	65.42
Zm00001d029083_P001	Maize	extracellular	61.97	65.27
Bra011843.1-P	Field mustard	mitochondrion	58.61	58.61
Zm00001d043951_P001	Maize	cytosol	26.47	57.53
GSMUA_Achr1P17230_001	Banana	peroxisome	26.47	55.75
Bra010671.1-P	Field mustard	mitochondrion	59.45	32.16
Bra008453.1-P	Field mustard	plastid	25.84	27.46
Bra035168.1-P	Field mustard	mitochondrion	25.63	27.05
Bra025033.1-P	Field mustard	mitochondrion	25.84	25.79
Bra017570.1-P	Field mustard	mitochondrion	15.34	25.17
Bra031332.1-P	Field mustard	mitochondrion	23.53	22.4
Bra023845.1-P	Field mustard	mitochondrion	23.32	22.16
Bra031335.1-P	Field mustard	mitochondrion	22.27	21.12
Bra038646.1-P	Field mustard	plastid	20.38	20.51
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	21.01	20.45
Bra035836.1-P	Field mustard	plastid	19.96	20.08
Bra031334.1-P	Field mustard	cytosol	8.61	19.43

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	EnsemblPlantsGene:Bra000060	EnsemblPlants:Bra000060.1
EnsemblPlants:Bra000060.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483	GO:GO:0016740
GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4C782	PFAM:PF00202	PIRSF:PIRSF000521
ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI000254009B	:	:	:	:

Description

AT2G38400 (E=4e-257) AGT3 | AGT3 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 3); alanine-glyoxylate transaminase/ catalytic/ pyridoxal phosphate binding / transaminase

Coordinates

chrA03:+:9114242..9116620

Molecular Weight (calculated)

51801.5 Da

IEP (calculated)

7.339

GRAVY (calculated)

-0.068

Length

476 amino acids

Sequence
(BLAST)

001: MMQRFTAKRS LQNVSASLLR RCISSTSQTA SVKDTDEFLA RLPPFDYTPP PYSGPSADEV LNKRKEFLSP SMPLLFRKPL NIVDGKMQYL FDESGRRYLD
101: AFAGIAVVNC GHCHPDVVEP VINQIKRLQH PTVMYLNHAI ADFSEALVSK LPGDLKVVFF TNSGTEANEL ALMMAKLYTG CQDIVSIRNG YHGNAAGTMG
201: ATGHSLWKFN VVQTGTHHAL NPDPYRGVFG SDGEKYARDV QDLIQYGTTG HIAGFICEAI QGVGGIVELA PGYMSAAYDI VKKAGGLFIA DEVQSGFART
301: GNFWGFEAHN VVPDIVTMAK GIGNGFPLGA VATTPEIAGV LTRRCYFNTF GGNAVATTAG LAVLNVIEKE KLQENASMVG SYLKGKLNQL KEKHEIIGDV
401: RGRGLMLGVE LVSDRKLKTP ATAETLHIMD QMKELGVLVG KGGYFGNVFR ITPPLCFTKE DADYLVDAMD YSISKM

Best Arabidopsis Sequence Match ( AT2G38400.1 )
(BLAST)

001: MQRFAAKRSV QNISVSLWRR CISSTSQAAT ASVKDSDEFQ ARLPPFAYTP PPYTGPSADV ILSKRKEFLS PSMFCLYRKP LNIVDGKMQY LFDESGRRYL
101: DAFAGIAVVN CGHCHPDVVE PVINQIKRLQ HPTVLYLNHA IADFSEALAS KLPGDLKVVF FTNSGTEANE LALMMAKLYT GCQDIVAVRN GYHGNAAATM
201: GATGQSMWKF NVVQNSVHHA LNPDPYRGVF GSDGEKYAKD LQDLIQYGTT GHIAGFICEA IQGVGGIVEL APGYLSAAYD TVKKAGGLFI ADEVQSGFAR
301: TGNFWGFEAH NVVPDIVTMA KGIGNGFPLG AVVTTPEIAG VLTRRSYFNT FGGNSVSTTA GLAVLNVIEK EKLQENAAMV GSYLKEKLTQ LKEKHEIIGD
401: VRGRGLMLGV ELVSDRKLKT PATAETLHIM DQMKELGVLI GKGGYFGNVF RITPPLCFTK DDADFLVEAM DYSMSKM

Arabidopsis Description

AGT3Alanine:glyoxylate aminotransferase 3 [Source:UniProtKB/TrEMBL;Acc:F4ISY3]
SUBAcon: [mitochondrion,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.