Factsheet for GSMUA_Achr5P08560_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
mitochondrion 2
peroxisome 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P17090_001	Banana	peroxisome	88.07	85.91
GSMUA_Achr6P32610_001	Banana	mitochondrion	85.32	78.15
VIT_06s0004g07660.t01	Wine grape	mitochondrion	84.17	76.78
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	83.49	76.31
KRH76075	Soybean	mitochondrion	82.11	75.37
KRH65497	Soybean	mitochondrion	81.42	74.74
CDY61533	Canola	peroxisome	31.88	74.33
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	80.5	73.43
Solyc10g076250.1.1	Tomato	mitochondrion	80.28	73.22
CDY14465	Canola	cytosol	70.64	72.47
GSMUA_Achr1P17230_001	Banana	peroxisome	36.93	71.24
KRH00394	Soybean	mitochondrion	78.21	70.75
Bra000060.1-P	Field mustard	mitochondrion	76.15	69.75
AT3G08860.1	Thale cress	mitochondrion	76.83	69.65
CDY54458	Canola	mitochondrion	75.69	69.62
Bra017119.1-P	Field mustard	mitochondrion	76.38	69.52
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	72.94	69.43
CDX73944	Canola	mitochondrion	74.77	69.36
Bra005111.1-P	Field mustard	mitochondrion	75.23	69.2
CDY00650	Canola	mitochondrion	74.54	69.15
CDY54421	Canola	mitochondrion	76.15	69.02
CDY00651	Canola	mitochondrion	74.08	68.72
CDY61531	Canola	mitochondrion	33.03	68.57
AT2G38400.2	Thale cress	mitochondrion	77.06	68.15
CDY66720	Canola	mitochondrion	76.61	67.89
GSMUA_Achr10P...	Banana	peroxisome	63.99	66.11
CDY18386	Canola	mitochondrion	34.4	64.38
CDY71561	Canola	mitochondrion	30.96	60.81
GSMUA_Achr9P04450_001	Banana	cytosol	29.36	31.92
GSMUA_Achr11P...	Banana	cytosol	25.69	30.52
GSMUA_Achr5P28220_001	Banana	cytosol	16.05	28.81
GSMUA_Achr10P...	Banana	mitochondrion	28.44	26.16
GSMUA_Achr5P00340_001	Banana	mitochondrion	25.69	22.18
GSMUA_Achr6P07940_001	Banana	plastid	23.85	21.94

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr5G08560_001	EnsemblPlants:GSMUA_Achr5P08560_001
EnsemblPlants:GSMUA_Achr5T08560_001	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0SWT5	PFAM:PF00202	PIRSF:PIRSF000521
ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI0002959D70	:	:	:	:

Description

Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr5G08560_001]

Coordinates

chr5:-:6247742..6252117

Molecular Weight (calculated)

47325.1 Da

IEP (calculated)

6.569

GRAVY (calculated)

0.007

Length

436 amino acids

Sequence
(BLAST)

001: MPPFDYTPPP YDGPSAAEIL RKRSEFLSPS MFCFYKKPLN IVDGKMQYLF DEDGRRYLDA FGGIATVCCG HCHPEVIEAI INQMKRLQHS TVLYLNHAIA
101: DFAEALASKL PGDLKVVFFT NSGTEANELA LMIARLYTGC HDIISLRNAY HGNAAGTMGA TAQCNWKFNV IQSGVHHALN PDQYRGVFGS DGEKYAKDVQ
201: EIIDFGTSGR VAGFISEAIQ GVGGILELAP GYLPSVYNSI KKAGGLCIAD EVQAGFARTG SHFWGFEAHG VVPDIVTMAK GIGNGIPIGA VVTTPEIAQV
301: LTRRSYFNTF GGNPVCTAGG HAVLKVLEKE KLQENALVVG SYLKDGLMAL KEKHEIIGDV RGRGLMLGVE LVTDRQQKTP AKTEILHVME TMKDLGVLVG
401: KGGFYGNVFR ITPPLCFSKE DSDFFVDAMD IALSKL

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.