Factsheet for GSMUA_Achr5P28220_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	82.3	54.5
GSMUA_Achr9P04450_001	Banana	cytosol	80.25	48.63
VIT_19s0027g01790.t01	Wine grape	plastid	72.43	37.69
VIT_09s0002g08670.t01	Wine grape	plastid	70.78	37.15
PGSC0003DMT400058543	Potato	cytosol, plastid	69.55	36.98
Solyc08g080370.2.1	Tomato	plastid	69.55	36.74
Bra008453.1-P	Field mustard	plastid	65.84	35.71
CDY37615	Canola	mitochondrion	65.84	35.71
CDY67620	Canola	mitochondrion, plastid	65.84	35.71
AT1G80600.1	Thale cress	plastid	66.67	35.45
Bra035168.1-P	Field mustard	mitochondrion	65.43	35.26
CDX87325	Canola	mitochondrion	65.43	35.26
CDY39963	Canola	mitochondrion	65.43	35.26
Os05t0129100-00	Rice	plastid	45.68	34.05
KRH35638	Soybean	cytosol	64.61	33.91
KRH48868	Soybean	nucleus	65.02	33.83
TraesCS1D01G074600.1	Wheat	plastid	62.96	33.26
TraesCS1A01G072200.1	Wheat	plastid	62.55	33.26
Os07t0461900-01	Rice	plastid	44.86	33.23
TraesCS1B01G090600.1	Wheat	plastid	62.55	33.04
EES17651	Sorghum	plastid	60.91	31.76
HORVU1Hr1G015560.5	Barley	plastid	63.37	30.08
Zm00001d035443_P001	Maize	plastid	60.08	29.49
CDY68670	Canola	cytosol	43.62	23.77
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	43.62	21.68
GSMUA_Achr10P...	Banana	peroxisome	30.45	17.54
GSMUA_Achr8P17090_001	Banana	peroxisome	29.63	16.11
GSMUA_Achr5P08560_001	Banana	peroxisome	28.81	16.05
GSMUA_Achr10P...	Banana	mitochondrion	29.63	15.19
GSMUA_Achr6P32610_001	Banana	mitochondrion	27.98	14.29
GSMUA_Achr6P07940_001	Banana	plastid	27.57	14.13
GSMUA_Achr5P00340_001	Banana	mitochondrion	25.93	12.48
GSMUA_Achr1P17230_001	Banana	peroxisome	8.23	8.85

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.2.6	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr5G28220_001	EnsemblPlants:GSMUA_Achr5P28220_001
EnsemblPlants:GSMUA_Achr5T28220_001	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0T2E6	PFAM:PF00202	PANTHER:PTHR11986
PANTHER:PTHR11986:SF79	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI000296BD55

Description

Acetylornithine aminotransferase, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr5G28220_001]

Coordinates

chr5:-:28504704..28507809

Molecular Weight (calculated)

27098.4 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.153

Length

243 amino acids

Sequence
(BLAST)

001: MELEKNVFVG TYARAPVVIQ SGKGCELYDV DGKEYPDMTA GIAVYSLGHG DPDWVNAMIE QAHTLTHVGN LYYSIPQVRL EFYLIYLYGC DSWKAPPVAN
101: SGTEANEAAI KFARKFQRFS HPDKKLPATE FIAFTHSFHG RTMGSVALTS KEHYRLPFEP VMPGVKFIEY GNFEEAKKAI QHGKTAAVFI EPIQGEGGIY
201: SATKDFLRAL RTACDDAGAL LVFDEVQCRL GRTGHLWLVR PLV

Best Arabidopsis Sequence Match ( AT1G80600.1 )
(BLAST)

001: MASLSQITLP RAPSSEIGLL RRRLERPIIR TRIGFNGRIA SVLTNAGDQA VSVKASVSQK VIEEEAKVIV GTYARAPVVL SSGKGCKLFD PEGKEYLDCA
101: SGIAVNALGH GDPDWLRAVT EQAGVLAHVS NVYYTIPQIE LAKRLVASSF ADRVFFCNSG TEANEAAIKF SRKFQRFTHP EDKEVATGFI AFTNSFHGRT
201: LGALALTSKE QYRTPFEPIM PGVTFLEYGN IQAATDLIRS GKIAAVFVEP IQGEGGIYSA TKEFLQSLRS ACDAAGSLLV FDEVQCGLGR TGLMWAYEAF
301: GVTPDIMTVA KPLAGGLPIG AVLVTEKVAE TINYGDHGST FAGSPLVCSA AIAVMDKVSK PSFLSSVSNK GRYFRDLLVK KLGGNSHVKE VRGEGLIIGV
401: ELDVPASSLV DACRDSGLLI LTAGKGNVVR IVPPLVISEE EIERAVEIMS QNLTALD

Arabidopsis Description

WIN1Acetylornithine aminotransferase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.