CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008453.1-P	Field mustard	plastid	99.55	99.55
CDY67620	Canola	mitochondrion, plastid	97.77	97.77
CDY39963	Canola	mitochondrion	93.08	92.46
CDX87325	Canola	mitochondrion	92.19	91.57
AT1G80600.1	Thale cress	plastid	91.74	89.93
GSMUA_Achr11P...	Banana	cytosol	60.27	73.57
GSMUA_Achr9P04450_001	Banana	cytosol	65.4	73.07
VIT_09s0002g08670.t01	Wine grape	plastid	71.43	69.11
KRH48868	Soybean	nucleus	71.21	68.31
PGSC0003DMT400058543	Potato	cytosol, plastid	68.97	67.61
Solyc08g080370.2.1	Tomato	plastid	68.97	67.17
KRH35638	Soybean	cytosol	68.53	66.31
Os05t0129100-00	Rice	plastid	47.99	65.95
GSMUA_Achr5P28220_001	Banana	cytosol	35.71	65.84
VIT_19s0027g01790.t01	Wine grape	plastid	67.86	65.1
Os07t0461900-01	Rice	plastid	47.32	64.63
CDY68670	Canola	cytosol	64.06	64.35
TraesCS1A01G072200.1	Wheat	plastid	62.5	61.27
TraesCS1B01G090600.1	Wheat	plastid	62.72	61.09
TraesCS1D01G074600.1	Wheat	plastid	62.28	60.65
EES17651	Sorghum	plastid	60.04	57.73
HORVU1Hr1G015560.5	Barley	plastid	62.95	55.08
Zm00001d035443_P001	Maize	plastid	60.71	54.95
CDY61533	Canola	peroxisome	13.17	31.55
CDY33459	Canola	mitochondrion	26.79	28.1
CDY18386	Canola	mitochondrion	14.51	27.9
CDX77642	Canola	mitochondrion	26.34	27.7
CDY14465	Canola	cytosol	26.12	27.53
CDY35151	Canola	mitochondrion	22.32	26.25
CDY54458	Canola	mitochondrion	27.46	25.95
CDX90347	Canola	mitochondrion	27.23	25.63
CDY63451	Canola	mitochondrion	27.23	25.63
CDY54421	Canola	mitochondrion	27.46	25.57
CDY42643	Canola	mitochondrion	26.79	25.21
CDY41995	Canola	mitochondrion	26.79	25.21
CDY66720	Canola	mitochondrion	27.46	25.0
CDX73944	Canola	mitochondrion	25.89	24.68
CDY00650	Canola	mitochondrion	25.89	24.68
CDY00651	Canola	mitochondrion	25.89	24.68
CDY03236	Canola	cytosol	20.54	23.9
CDY58748	Canola	mitochondrion	26.34	23.69
CDY39506	Canola	mitochondrion	26.56	23.52
CDY10622	Canola	golgi	24.78	23.52
CDY10619	Canola	mitochondrion	26.12	23.4
CDY37389	Canola	mitochondrion	26.12	23.4
CDY61531	Canola	mitochondrion	10.27	21.9
CDY71561	Canola	mitochondrion	10.49	21.17
CDY62883	Canola	plastid	22.32	21.14
CDY41519	Canola	plastid	22.1	20.93
CDY16715	Canola	plastid	22.1	20.93
CDX81186	Canola	plastid	22.1	20.93
CDY10621	Canola	extracellular, plastid	8.26	15.68

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.1.1.1.4	GO:A0A078HH16	UniProt:A0A078HH16	InterPro:AcOrn/SuccOrn_fam
InterPro:Aminotrans_3	EnsemblPlants:CDY37615	ProteinID:CDY37615	ProteinID:CDY37615.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006525	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009987
GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00064251001	InterPro:IPR015421	InterPro:IPR015422	HAMAP:MF_01107
PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF79	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TIGRFAMs:TIGR00707	UniParc:UPI0004EEE3D1	:

Description

BnaA02g19550DBnaA02g19550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HH16]

Coordinates

chrLK032403:-:341923..344218

Molecular Weight (calculated)

47898.0 Da

IEP (calculated)

7.790

GRAVY (calculated)

0.172

Length

448 amino acids

Sequence
(BLAST)

001: MASIGQITLP RAPWLQKSLL RRPIRTPIRF NGRIASVLTN AGSVKASVSQ KVIEEEAKVL VGTYARAPVV LSSGKGCKLM DAEGKEYLDC ASGIAVNALG
101: HGDPDWLQAV TDQAALLAHV SNVYYTIPQI ELAKRLVASS FADRVFFCNS GTEANEAAIK FSRKFQRFTH PEDKEVATSF IAFTNSFHGR TLGALALTSK
201: EQYRTPFEPI MPGVTFLEYG NTQAATDLIR LGKIAAVFVE PIQGEGGVYS ATKEFLQSLR SACDAAGSLL VFDEVQCGLG RTGNLWAYEA FGVTPDIMTV
301: AKPLAGGLPI GAVLVTEKVA ETIKYGDHGS TFAGNPLVCS AAIAVFDKVS KPSFLASVSS KGLYFKDLLV KKLGGNLHVK EVRGKGLIIG VELDVPAGPL
401: VDACRDSGLL ILTAGKGNVV RIVPPLIISE EEIERAVEII FHNLTALD

Best Arabidopsis Sequence Match ( AT1G80600.1 )
(BLAST)

001: MASLSQITLP RAPSSEIGLL RRRLERPIIR TRIGFNGRIA SVLTNAGDQA VSVKASVSQK VIEEEAKVIV GTYARAPVVL SSGKGCKLFD PEGKEYLDCA
101: SGIAVNALGH GDPDWLRAVT EQAGVLAHVS NVYYTIPQIE LAKRLVASSF ADRVFFCNSG TEANEAAIKF SRKFQRFTHP EDKEVATGFI AFTNSFHGRT
201: LGALALTSKE QYRTPFEPIM PGVTFLEYGN IQAATDLIRS GKIAAVFVEP IQGEGGIYSA TKEFLQSLRS ACDAAGSLLV FDEVQCGLGR TGLMWAYEAF
301: GVTPDIMTVA KPLAGGLPIG AVLVTEKVAE TINYGDHGST FAGSPLVCSA AIAVMDKVSK PSFLSSVSNK GRYFRDLLVK KLGGNSHVKE VRGEGLIIGV
401: ELDVPASSLV DACRDSGLLI LTAGKGNVVR IVPPLVISEE EIERAVEIMS QNLTALD

Arabidopsis Description

WIN1Acetylornithine aminotransferase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.