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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 3
  • peroxisome 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031335.1-P Field mustard mitochondrion 97.67 91.83
CDY37389 Canola mitochondrion 83.9 79.2
CDY10619 Canola mitochondrion 83.9 79.2
CDY58748 Canola mitochondrion 82.84 78.51
CDY39506 Canola mitochondrion 82.63 77.08
AT3G22200.2 Thale cress mitochondrion 78.81 72.51
PGSC0003DMT400064961 Potato cytosol 69.49 71.62
Solyc08g014610.2.1 Tomato cytosol 68.64 70.74
Zm00001d019161_P001 Maize cytosol, mitochondrion, nucleus 15.89 70.09
Solyc12g006470.1.1 Tomato extracellular, nucleus 68.01 70.09
Solyc07g043310.2.1 Tomato nucleus 76.06 69.71
PGSC0003DMT400030683 Potato mitochondrion 76.06 69.71
PGSC0003DMT400062385 Potato cytosol, peroxisome, plastid 45.13 69.61
KRH24110 Soybean mitochondrion 75.64 69.59
Solyc12g006450.1.1 Tomato plastid 75.85 69.38
PGSC0003DMT400062372 Potato plastid 75.85 69.38
VIT_03s0017g01720.t01 Wine grape cytosol, peroxisome, plastid 71.61 68.56
Os02t0112900-00 Rice cytosol 69.7 68.12
KRH29085 Soybean cytosol 76.06 67.74
Os04t0614600-01 Rice mitochondrion 73.94 67.64
Os04t0614500-01 Rice plastid 71.19 67.61
EES14702 Sorghum mitochondrion 72.88 67.58
Zm00001d037507_P015 Maize cytosol, nucleus, peroxisome 22.03 67.53
TraesCS7B01G253600.1 Wheat cytosol, nucleus, peroxisome 69.07 67.36
GSMUA_Achr5P00340_001 Banana mitochondrion 72.03 67.33
TraesCS2B01G440400.1 Wheat golgi 72.88 67.32
EES11419 Sorghum mitochondrion 72.88 67.32
TraesCS2D01G418400.2 Wheat mitochondrion 72.67 67.12
HORVU2Hr1G098880.1 Barley mitochondrion 72.67 67.12
TraesCS2A01G421400.1 Wheat mitochondrion 72.67 67.12
Os08t0205900-01 Rice mitochondrion 72.46 67.06
TraesCS7B01G246800.1 Wheat mitochondrion 71.82 66.73
Zm00001d049380_P011 Maize endoplasmic reticulum, mitochondrion 72.67 66.73
TraesCS7D01G341900.2 Wheat mitochondrion 71.61 66.54
Zm00001d026293_P001 Maize mitochondrion 72.03 66.15
Zm00001d015445_P008 Maize cytosol 19.92 65.73
Zm00001d002326_P003 Maize mitochondrion 71.82 65.44
TraesCS7A01G334200.1 Wheat mitochondrion 70.55 64.53
TraesCS7A01G373400.1 Wheat plastid 63.77 64.04
HORVU7Hr1G082330.2 Barley mitochondrion, plastid 71.4 60.07
Zm00001d015444_P003 Maize mitochondrion 26.27 58.49
CDY10621 Canola extracellular, plastid 28.39 56.78
CDY61533 Canola peroxisome 11.23 28.34
CDY39963 Canola mitochondrion 23.94 25.06
CDX87325 Canola mitochondrion 23.94 25.06
CDY67620 Canola mitochondrion, plastid 23.73 25.0
CDY37615 Canola mitochondrion 23.52 24.78
CDX77642 Canola mitochondrion 21.19 23.47
CDY14465 Canola cytosol 20.97 23.29
CDY33459 Canola mitochondrion 20.97 23.18
CDY18386 Canola mitochondrion 11.44 23.18
CDY41995 Canola mitochondrion 21.61 21.43
CDY42643 Canola mitochondrion 21.61 21.43
CDY63451 Canola mitochondrion 21.4 21.22
CDX90347 Canola mitochondrion 21.4 21.22
CDY54458 Canola mitochondrion 21.19 21.1
CDX73944 Canola mitochondrion 20.97 21.06
CDY00650 Canola mitochondrion 20.97 21.06
CDY66720 Canola mitochondrion 21.82 20.93
CDY00651 Canola mitochondrion 20.76 20.85
CDY54421 Canola mitochondrion 21.19 20.79
CDY35151 Canola mitochondrion 16.74 20.73
CDY68670 Canola cytosol 17.8 18.83
CDY62883 Canola plastid 18.43 18.39
CDY41519 Canola plastid 18.22 18.18
CDY03236 Canola cytosol 14.41 17.66
CDY71561 Canola mitochondrion 8.26 17.57
CDX81186 Canola plastid 17.37 17.34
CDY16715 Canola plastid 17.37 17.34
CDY61531 Canola mitochondrion 7.2 16.19
Protein Annotations
Gene3D:3.40.640.10Gene3D:3.90.1150.10MapMan:4.2.2.1GO:A0A078FCA8UniProt:A0A078FCA8InterPro:Aminotrans_3
EnsemblPlants:CDY10622ProteinID:CDY10622ProteinID:CDY10622.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008483GO:GO:0016740GO:GO:0030170EnsemblPlantsGene:GSBRNA2T00048353001InterPro:IPR015421InterPro:IPR015422
PFAM:PF00202PIRSF:PIRSF000521ScanProsite:PS00600PANTHER:PTHR42684PANTHER:PTHR42684:SF5InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383UniParc:UPI0004EEA12B::
Description
BnaA05g17400DGamma-aminobutyrate transaminase POP2, mitochondrial [Source:Projected from Arabidopsis thaliana (AT3G22200) UniProtKB/Swiss-Prot;Acc:Q94CE5]
Coordinates
chrLK032005:+:40241..43456
Molecular Weight (calculated)
52273.1 Da
IEP (calculated)
6.890
GRAVY (calculated)
-0.060
Length
472 amino acids
Sequence
(BLAST)
001: MSLTGLAITQ IYILFCYRPK GHSMLAPFTA GWQSSDLDPM IIAKSEGCYV YDAHGKKYLD SLAGLWCTAL GGSEARLVSA AVSQLNTLPF YHSFWNFTTK
101: PSLDLAQDLL DMFTAKNMAK AFFTNSGSEA NDTQVKLVWY YNNALGRPKK KKIIARSTSY HGSTLVSASL SAMPVMHQDF DLPSSYMRYT DCPHYWRYHL
201: PGETEEEFST RLAKNLEDLI LKEGPQTIGA FIAEPLMGAG GVIPPPDSYF EKVQAVLKKY DILFIADEVI CAFGRLGTMF GCDKYNIKPD LVSLAKALSS
301: AYVPIGAVLV SQEVADVIYS QSNKIGTFAH GFTYSGHPVS CAVAIEALKI YKERNIPEHV NRVSTRFQEG LRAFSTSPII GEIRGTGLIL ATEFTENKSA
401: HEPFPPEWGV GEYFAAECKK QGMIVRVAGD LIMMCPPLII SPEEINELIT IYGKALKATE EMVKELKTQQ KK
Best Arabidopsis Sequence Match ( AT3G22200.1 )
(BLAST)
001: MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA
101: LGGNEPRLVS AAVEQLNTLP FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE KKKFIARKKS YHGSTLISAS
201: LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV
301: ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD
401: GVKAFASGSP IIGETRGTGL ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL ISIYGKALKA TEEKVKELKA
501: QHKK
Arabidopsis Description
POP2Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:TAIR;Acc:AT3G22200]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.