Factsheet for Os04t0614500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 4

Predictors

GFP

MS/MS

Papers

plastid: 23122787

plastid: 15276442

gfp PMID: 23122787 doi

Y Shimajiri, K Ozaki, K Kainou, K Akama

Department of Biological Science, Shimane University, 1060 Nishikawatsu-chou, Matsue 690-8504, Japan.

msms PMID: 15276442 doi

BK Kristensen, P Askerlund, NV Bykova, H Egsgaard, IM Møller

Risø National Laboratory, Plant Research Department, P.O. Box 49, DK-4000 Roskilde, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019161_P001	Maize	cytosol, mitochondrion, nucleus	17.1	79.44
Os04t0614600-01	Rice	mitochondrion	80.89	77.91
Os02t0112900-00	Rice	cytosol	74.65	76.81
Os08t0205900-01	Rice	mitochondrion	76.26	74.31
GSMUA_Achr5P00340_001	Banana	mitochondrion	75.05	73.86
PGSC0003DMT400064961	Potato	cytosol	66.6	72.27
CDY37389	Canola	mitochondrion	71.83	71.4
Solyc12g006470.1.1	Tomato	extracellular, nucleus	65.79	71.4
Bra031332.1-P	Field mustard	mitochondrion	71.63	71.2
CDY10619	Canola	mitochondrion	71.63	71.2
CDY10622	Canola	golgi	67.61	71.19
CDY58748	Canola	mitochondrion	71.23	71.08
Solyc08g014610.2.1	Tomato	cytosol	65.19	70.74
Bra023845.1-P	Field mustard	mitochondrion	71.03	70.46
PGSC0003DMT400030683	Potato	mitochondrion	72.84	70.29
PGSC0003DMT400062385	Potato	cytosol, peroxisome, plastid	43.26	70.26
CDY39506	Canola	mitochondrion	71.23	69.96
Solyc07g043310.2.1	Tomato	nucleus	72.43	69.9
KRH24110	Soybean	mitochondrion	72.03	69.79
VIT_03s0017g01720.t01	Wine grape	cytosol, peroxisome, plastid	68.81	69.37
PGSC0003DMT400062372	Potato	plastid	71.23	68.6
Solyc12g006450.1.1	Tomato	plastid	71.03	68.41
VIT_03s0017g01760.t01	Wine grape	mitochondrion	71.83	67.74
Bra031335.1-P	Field mustard	mitochondrion	68.41	67.73
AT3G22200.2	Thale cress	mitochondrion	69.62	67.45
KRH29085	Soybean	cytosol	71.03	66.6
Bra031334.1-P	Field mustard	cytosol	22.13	52.13
CDY10621	Canola	extracellular, plastid	24.35	51.27
Os05t0475400-02	Rice	peroxisome	20.72	26.34
Os03t0643300-02	Rice	mitochondrion	23.14	24.31
Os03t0171900-01	Rice	mitochondrion	23.14	23.66
Os05t0129100-00	Rice	plastid	15.09	23.01
Os03t0338000-01	Rice	peroxisome	22.33	22.93
Os07t0461900-01	Rice	plastid	15.09	22.87
Os08t0532200-01	Rice	plastid	18.91	19.67

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.2.2.1	EntrezGene:4336982	EMBL:AK100259	InterPro:Aminotrans_3
ProteinID:BAF15776.1	ProteinID:BAS90991.1	ProteinID:CAE04332.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008483
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0030170	GO:GO:0034387	GO:GO:0102351
InterPro:IPR015421	InterPro:IPR015422	EnsemblPlantsGene:Os04g0614500	EnsemblPlants:Os04t0614500-01	PFAM:PF00202	PIRSF:PIRSF000521
ScanProsite:PS00600	PANTHER:PTHR42684	PANTHER:PTHR42684:SF5	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
UniProt:Q7XN12	SUPFAM:SSF53383	UniParc:UPI000021C81E	RefSeq:XP_015635718.1	SEG:seg	:

Description

Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os04t0614500-01)

Coordinates

chr4:+:31169012..31174731

Molecular Weight (calculated)

54021.6 Da

IEP (calculated)

6.706

GRAVY (calculated)

-0.092

Length

497 amino acids

Sequence
(BLAST)

001: MNLIKHAAFA ASFQGETDCT SHASARKFST SGSSPLLDST EGNGFKGHSM LAPFTAGWHS TDLEPLIIER SEGSYVYDSK GNKYLDTLAG LWCTALGGSE
101: PRLVKAATDQ LNKLPFYHSF WNSTAKPPLD LAEELISMFT AKEMGKVFFT NSGSEANDSQ VKLVWYYNNA LGRPNKKKII AQSQAYHGST LISASLSGLP
201: AMHLKFDLPA PFVLHTDCPH YWRFGLPGEA EEEFATRLAD NLENLILKEG PETVAAFIAE PVIGAGGVIP PPKTYFEKIQ AVLQKYDVLF IADEVITGFG
301: RLGTMFGSDL YNIKPDLVSL AKALSSAYVP IGATLVSPEI SDVVHSQSNK IGFFAHGFTY SGHPVSCAVA LEALKIYRER NIPAHVKQIS PRFQEGIKAF
401: AGSSIIGETR GVGLLLATEF ANNKSPNDPF PVEWGVAQIF GAECKKRGML VKVVGDEIAM SPPLIMSQRE VDGLVSIYGE ALKATEERVA ELRSKKK

Best Arabidopsis Sequence Match ( AT3G22200.1 )
(BLAST)

001: MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA
101: LGGNEPRLVS AAVEQLNTLP FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE KKKFIARKKS YHGSTLISAS
201: LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV
301: ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD
401: GVKAFASGSP IIGETRGTGL ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL ISIYGKALKA TEEKVKELKA
501: QHKK

Arabidopsis Description

POP2Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:TAIR;Acc:AT3G22200]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.