Factsheet for Bra031335.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
nucleus 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10622	Canola	golgi	91.83	97.67
Bra031332.1-P	Field mustard	mitochondrion	83.07	83.4
Bra023845.1-P	Field mustard	mitochondrion	82.47	82.63
AT3G22200.2	Thale cress	mitochondrion	77.69	76.02
PGSC0003DMT400064961	Potato	cytosol	65.74	72.05
KRH24110	Soybean	mitochondrion	73.11	71.54
Solyc08g014610.2.1	Tomato	cytosol	64.94	71.18
PGSC0003DMT400062372	Potato	plastid	72.51	70.54
Solyc12g006450.1.1	Tomato	plastid	72.51	70.54
Solyc12g006470.1.1	Tomato	extracellular, nucleus	64.34	70.52
PGSC0003DMT400030683	Potato	mitochondrion	72.11	70.29
Solyc07g043310.2.1	Tomato	nucleus	72.11	70.29
Zm00001d019161_P001	Maize	cytosol, mitochondrion, nucleus	14.94	70.09
KRH29085	Soybean	cytosol	73.31	69.43
VIT_03s0017g01720.t01	Wine grape	cytosol, peroxisome, plastid	68.13	69.37
PGSC0003DMT400062385	Potato	cytosol, peroxisome, plastid	42.23	69.28
EES14702	Sorghum	mitochondrion	70.12	69.16
TraesCS2B01G440400.1	Wheat	golgi	69.92	68.69
Os04t0614600-01	Rice	mitochondrion	70.52	68.6
GSMUA_Achr5P00340_001	Banana	mitochondrion	68.92	68.51
TraesCS2A01G421400.1	Wheat	mitochondrion	69.72	68.49
TraesCS2D01G418400.2	Wheat	mitochondrion	69.72	68.49
Os08t0205900-01	Rice	mitochondrion	69.52	68.43
Os04t0614500-01	Rice	plastid	67.73	68.41
TraesCS7B01G246800.1	Wheat	mitochondrion	69.12	68.31
HORVU2Hr1G098880.1	Barley	mitochondrion	69.52	68.3
EES11419	Sorghum	mitochondrion	69.52	68.3
Os02t0112900-00	Rice	cytosol	65.54	68.12
TraesCS7D01G341900.2	Wheat	mitochondrion	68.92	68.11
TraesCS7B01G253600.1	Wheat	cytosol, nucleus, peroxisome	65.34	67.77
Zm00001d049380_P011	Maize	endoplasmic reticulum, mitochondrion	69.32	67.7
Zm00001d026293_P001	Maize	mitochondrion	68.53	66.93
Zm00001d037507_P015	Maize	cytosol, nucleus, peroxisome	20.52	66.88
Zm00001d002326_P003	Maize	mitochondrion	68.53	66.41
TraesCS7A01G334200.1	Wheat	mitochondrion	67.93	66.09
Zm00001d015445_P008	Maize	cytosol	18.53	65.03
TraesCS7A01G373400.1	Wheat	plastid	60.36	64.47
HORVU7Hr1G082330.2	Barley	mitochondrion, plastid	68.53	61.32
Bra031334.1-P	Field mustard	cytosol	24.9	59.24
Zm00001d015444_P003	Maize	mitochondrion	24.5	58.02
Bra008453.1-P	Field mustard	plastid	23.11	25.89
Bra035168.1-P	Field mustard	mitochondrion	22.91	25.5
Bra025033.1-P	Field mustard	mitochondrion	23.31	24.53
Bra017570.1-P	Field mustard	mitochondrion	13.35	23.1
Bra011843.1-P	Field mustard	mitochondrion	21.31	22.48
Bra000060.1-P	Field mustard	mitochondrion	21.12	22.27
Bra005111.1-P	Field mustard	mitochondrion	20.92	22.15
Bra017119.1-P	Field mustard	mitochondrion	20.92	21.92
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	19.92	21.83
Bra038646.1-P	Field mustard	plastid	16.93	17.97
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	16.93	17.38
Bra035836.1-P	Field mustard	plastid	16.14	17.12
Bra010671.1-P	Field mustard	mitochondrion	20.92	11.93

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.2.2.1	InterPro:Aminotrans_3	EnsemblPlantsGene:Bra031335	EnsemblPlants:Bra031335.1
EnsemblPlants:Bra031335.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483
GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4ERB2	PFAM:PF00202
PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR42684	PANTHER:PTHR42684:SF5	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI000254760A	:	:	:

Description

AT3G22200 (E=2e-237) POP2, GABA-T, HER1 | POP2 (POLLEN-PISTIL INCOMPATIBILITY 2); 4-aminobutyrate transaminase/ 4-aminobutyrate:pyruvate transaminase

Coordinates

chrA05:-:15904901..15910028

Molecular Weight (calculated)

55516.8 Da

IEP (calculated)

8.186

GRAVY (calculated)

-0.128

Length

502 amino acids

Sequence
(BLAST)

001: MAVINSLRRL ARTTQVNLQS RYLASSQRMP GSRIFTTEAS TVKRNTVGPK GHSMLAPFTA GWQSSDLDPM IIAKSEGCYV YDAHGKKYLD SLAGLWCTAL
101: GGSEARLVSA AVSQLNTLPF YHSFWNFTTK PSLDLAQDLL DMFTAKNMAK AFFTNSGSEA NDTQVKLVWY YNNALGRPKK KKIIARSTSY HGSTLVSASL
201: SAMPVMHQDF DLPSSYMRYT DCPHYWRYHL PGETEEEFST RLAKNLEDLI LKEGPQTIGA FIAEPLMGAG GVIPPPDSYF EKVQAVLKKY DILFIADEVI
301: CAFGRLGTMF GCDKYNIKPD LVSLAKALSS AYVPIGAVLV SQEVADVIYS QSNKIGTFAH GFTYSGHPVS CAVAIEALKI YKERNIPEHV NRVSTRFQEG
401: LRAFSTSPII GEIRGTGLIL ATEFTENKSA HEPFPPEWGV GEYFAAECKK QGIIVRVAGD LIMMCPPLII SPEEINELIT IYGKALKATE EMVKELKTQQ
501: KK

Best Arabidopsis Sequence Match ( AT3G22200.1 )
(BLAST)

001: MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA
101: LGGNEPRLVS AAVEQLNTLP FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE KKKFIARKKS YHGSTLISAS
201: LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV
301: ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD
401: GVKAFASGSP IIGETRGTGL ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL ISIYGKALKA TEEKVKELKA
501: QHKK

Arabidopsis Description

POP2Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:TAIR;Acc:AT3G22200]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.