Factsheet for TraesCS7B01G253600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G373400.1	Wheat	plastid	87.4	90.0
Os02t0112900-00	Rice	cytosol	88.64	88.82
Zm00001d019161_P001	Maize	cytosol, mitochondrion, nucleus	16.53	74.77
CDY58748	Canola	mitochondrion	71.07	69.08
CDY10622	Canola	golgi	67.36	69.07
GSMUA_Achr5P00340_001	Banana	mitochondrion	71.9	68.91
TraesCS2B01G440400.1	Wheat	golgi	72.52	68.69
Bra023845.1-P	Field mustard	mitochondrion	70.87	68.46
CDY37389	Canola	mitochondrion	70.66	68.4
CDY10619	Canola	mitochondrion	70.66	68.4
Bra031332.1-P	Field mustard	mitochondrion	70.66	68.4
PGSC0003DMT400064961	Potato	cytosol	64.46	68.12
CDY39506	Canola	mitochondrion	71.07	67.98
TraesCS7B01G246800.1	Wheat	mitochondrion	71.07	67.72
VIT_03s0017g01720.t01	Wine grape	cytosol, peroxisome, plastid	68.59	67.34
Solyc08g014610.2.1	Tomato	cytosol	63.64	67.25
Solyc12g006470.1.1	Tomato	extracellular, nucleus	63.22	66.81
PGSC0003DMT400062385	Potato	cytosol, peroxisome, plastid	41.94	66.34
KRH24110	Soybean	mitochondrion	69.63	65.69
Bra031335.1-P	Field mustard	mitochondrion	67.77	65.34
AT3G22200.2	Thale cress	mitochondrion	69.21	65.3
PGSC0003DMT400062372	Potato	plastid	69.42	65.12
Solyc12g006450.1.1	Tomato	plastid	68.8	64.53
PGSC0003DMT400030683	Potato	mitochondrion	67.77	63.69
VIT_03s0017g01760.t01	Wine grape	mitochondrion	69.21	63.57
Solyc07g043310.2.1	Tomato	nucleus	67.36	63.3
KRH29085	Soybean	cytosol	69.21	63.21
Bra031334.1-P	Field mustard	cytosol	23.35	53.55
CDY10621	Canola	extracellular, plastid	25.41	52.12
TraesCS4B01G288100.1	Wheat	mitochondrion	23.76	24.01
TraesCS4B01G167100.1	Wheat	mitochondrion	22.73	23.97
TraesCS5B01G376900.1	Wheat	mitochondrion	22.93	23.72
TraesCS1B01G090600.1	Wheat	plastid	22.52	23.7
TraesCS1B01G308900.1	Wheat	mitochondrion	22.93	23.27
TraesCS7B01G158800.1	Wheat	plastid	19.42	19.92

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.2.2.1	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422
PFAM:PF00202	ScanProsite:PS00600	PANTHER:PTHR42684	PANTHER:PTHR42684:SF5	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	EnsemblPlantsGene:TraesCS7B01G253600	EnsemblPlants:TraesCS7B01G253600.1	TIGR:cd00610	SEG:seg

Description

No Description!

Coordinates

chr7B:-:467528239..467535225

Molecular Weight (calculated)

53177.7 Da

IEP (calculated)

6.351

GRAVY (calculated)

-0.084

Length

484 amino acids

Sequence
(BLAST)

001: METPRGLLQS DASADQVASE RSDSVQQHGV DKEHAMLAPF TAGWQTAISP TLIIERSEGC YIYDANGNKY LDALAGLLST ALGGSEPRLV KAATEQLNKL
101: PFYHSFYNHT TRPSLDLANE LISIFTARQM GKVFFTCSGS EANDSQVKLV WYYNNALGRP KKKKIIARSQ SYHGTTYISA SLSGLPTLHQ DFDLPGNFVL
201: HTDCPHYWRF HLPGETEEEF ATRLANNLEN LILKEGPDTI AAFIAEPVIG AGGVILPPKT YFEKIQEVVK KHDILFIVDE VITGFGRLGA MFGSDLYDIK
301: PDLVSLAKAL SSAYAPIGAI LVSREISDVI YSHSNKLGTF AHGFTYSGHP VSCVVALEAL KIYRERDIPG HVAHVAQRFQ EGIKAFAAKS PIIGETRGVG
401: LLIATEFTDN KSPYDLFPFE WGIGETFGAE CKKRGMVVKV LGNLIAMSPP LIITLEEIDK LVSIYGEALK VTEERVAECK AKKE

Best Arabidopsis Sequence Match ( AT3G22200.1 )
(BLAST)

001: MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA
101: LGGNEPRLVS AAVEQLNTLP FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE KKKFIARKKS YHGSTLISAS
201: LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV
301: ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD
401: GVKAFASGSP IIGETRGTGL ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL ISIYGKALKA TEEKVKELKA
501: QHKK

Arabidopsis Description

POP2Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:TAIR;Acc:AT3G22200]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.