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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 5
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY10622 Canola golgi 72.51 78.81
Bra031335.1-P Field mustard mitochondrion 76.02 77.69
KRH24110 Soybean mitochondrion 75.63 75.63
Solyc07g043310.2.1 Tomato nucleus 74.66 74.37
PGSC0003DMT400030683 Potato mitochondrion 74.66 74.37
Solyc12g006470.1.1 Tomato extracellular, nucleus 66.08 74.02
PGSC0003DMT400064961 Potato cytosol 65.89 73.8
PGSC0003DMT400062372 Potato plastid 74.07 73.64
Os04t0614600-01 Rice mitochondrion 73.88 73.45
Solyc12g006450.1.1 Tomato plastid 73.88 73.45
KRH29085 Soybean cytosol 75.63 73.21
HORVU2Hr1G098880.1 Barley mitochondrion 72.9 73.19
Solyc08g014610.2.1 Tomato cytosol 65.3 73.14
GSMUA_Achr5P00340_001 Banana mitochondrion 71.93 73.07
TraesCS2A01G421400.1 Wheat mitochondrion 72.51 72.8
TraesCS2B01G440400.1 Wheat golgi 72.51 72.8
PGSC0003DMT400062385 Potato cytosol, peroxisome, plastid 43.08 72.22
TraesCS2D01G418400.2 Wheat mitochondrion 71.93 72.21
Os08t0205900-01 Rice mitochondrion 71.73 72.16
EES14702 Sorghum mitochondrion 71.54 72.1
VIT_03s0017g01720.t01 Wine grape cytosol, peroxisome, plastid 69.2 72.01
TraesCS7D01G341900.2 Wheat mitochondrion 71.15 71.85
EES11419 Sorghum mitochondrion 71.34 71.62
TraesCS7B01G246800.1 Wheat mitochondrion 70.76 71.46
Zm00001d037507_P015 Maize cytosol, nucleus, peroxisome 21.44 71.43
Zm00001d049380_P011 Maize endoplasmic reticulum, mitochondrion 71.34 71.21
Zm00001d019161_P001 Maize cytosol, mitochondrion, nucleus 14.81 71.03
Os02t0112900-00 Rice cytosol 66.86 71.01
Zm00001d026293_P001 Maize mitochondrion 70.57 70.43
Zm00001d015445_P008 Maize cytosol 19.49 69.93
Os04t0614500-01 Rice plastid 67.45 69.62
TraesCS7A01G334200.1 Wheat mitochondrion 69.98 69.57
TraesCS7B01G253600.1 Wheat cytosol, nucleus, peroxisome 65.3 69.21
Zm00001d002326_P003 Maize mitochondrion 69.79 69.11
TraesCS7A01G373400.1 Wheat plastid 60.43 65.96
HORVU7Hr1G082330.2 Barley mitochondrion, plastid 71.54 65.42
Zm00001d015444_P003 Maize mitochondrion 26.12 63.21
AT1G80600.1 Thale cress plastid 22.22 24.95
AT5G46180.1 Thale cress mitochondrion 22.42 24.21
AT4G39660.1 Thale cress mitochondrion 21.83 23.53
AT3G08860.1 Thale cress mitochondrion 20.66 22.04
AT2G38400.2 Thale cress mitochondrion 21.05 21.91
AT3G48730.1 Thale cress plastid 17.93 19.49
AT5G63570.1 Thale cress plastid 17.54 18.99
Protein Annotations
Gene3D:3.40.640.10Gene3D:3.90.1150.10MapMan:4.2.2.1EntrezGene:821784ProteinID:AEE76603.1ArrayExpress:AT3G22200
EnsemblPlantsGene:AT3G22200RefSeq:AT3G22200TAIR:AT3G22200RefSeq:AT3G22200-TAIR-GEnsemblPlants:AT3G22200.2TAIR:AT3G22200.2
InterPro:Aminotrans_3Unigene:At.22661ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008483GO:GO:0016740GO:GO:0030170InterPro:IPR015421InterPro:IPR015422RefSeq:NP_001189947.1
PFAM:PF00202PIRSF:PIRSF000521PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000084
PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007131PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009001PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020003PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281Symbol:POP2ScanProsite:PS00600
PANTHER:PTHR42684PANTHER:PTHR42684:SF5InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383
UniParc:UPI0001E92E1A:::::
Description
POP2Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:TAIR;Acc:AT3G22200]
Coordinates
chr3:+:7835144..7838888
Molecular Weight (calculated)
56368.0 Da
IEP (calculated)
8.431
GRAVY (calculated)
-0.127
Length
513 amino acids
Sequence
(BLAST)
001: MPTIVNKNLI FFQNAKLTWI RMKKVHLHSK YATCMSGNST SRRIFTTEAA PEKKNTVGSK GHDMLAPFTA GWQSADLDPL VIAKSEGSYV YDDTGKKYLD
101: SLAGLWCTAL GGNEPRLVSA AVEQLNTLPF YHSFWNRTTK PSLDLAKVLL EMFTANKMAK AFFTSGGSDA NDTQVKLVWY YNNALGRPEK KKFIARKKSY
201: HGSTLISASL SGLPPLHQNF DLPAPFVLHT DCPHYWRFHL PGETEEEFST RLAKNLEDLI IKEGPETIGA FIAEPVMGAG GVIPPPATYF EKVQAVVKKY
301: DILFIADEVI CAFGRLGTMF GCDKYNIKPD LVTLAKALSS AYMPIGAILM SQEVADVINS HSSKLGVFSH GFTYSGHPVS CAVAIEALKI YKERNIPEYV
401: AKVAPRFQDG VKAFASGSPI IGETRGTGLI LGTEFVDNKS PNEPFPPEWG VGAFFGAECQ KHGMLVRVAG DGILMSPPLI ISPEEIDELI SIYGKALKAT
501: EEKVKELKAQ HKK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.