CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
nucleus 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037507_P015	Maize	cytosol, nucleus, peroxisome	28.68	94.81
Zm00001d049380_P011	Maize	endoplasmic reticulum, mitochondrion	94.7	93.77
Zm00001d015445_P008	Maize	cytosol	26.33	93.71
Os08t0205900-01	Rice	mitochondrion	89.19	89.02
TraesCS7D01G341900.2	Wheat	mitochondrion	88.41	88.58
TraesCS7B01G246800.1	Wheat	mitochondrion	87.82	87.99
TraesCS7A01G334200.1	Wheat	mitochondrion	86.64	85.47
HORVU7Hr1G082330.2	Barley	mitochondrion, plastid	88.8	80.57
GSMUA_Achr5P00340_001	Banana	mitochondrion	79.76	80.4
Zm00001d015444_P003	Maize	mitochondrion	33.2	79.72
EES11419	Sorghum	mitochondrion	79.57	79.26
CDY58748	Canola	mitochondrion	75.64	77.31
Bra023845.1-P	Field mustard	mitochondrion	75.83	77.05
CDY39506	Canola	mitochondrion	75.83	76.28
Bra031332.1-P	Field mustard	mitochondrion	74.66	76.0
CDY37389	Canola	mitochondrion	74.66	76.0
CDY10619	Canola	mitochondrion	74.66	76.0
KRH24110	Soybean	mitochondrion	76.23	75.63
Solyc12g006450.1.1	Tomato	plastid	75.64	74.61
PGSC0003DMT400062372	Potato	plastid	74.66	73.64
PGSC0003DMT400030683	Potato	mitochondrion	74.07	73.2
Solyc07g043310.2.1	Tomato	nucleus	74.07	73.2
VIT_03s0017g01720.t01	Wine grape	cytosol, peroxisome, plastid	70.73	73.02
PGSC0003DMT400064961	Potato	cytosol	65.62	72.93
Solyc08g014610.2.1	Tomato	cytosol	65.62	72.93
CDY10622	Canola	golgi	67.58	72.88
VIT_03s0017g01760.t01	Wine grape	mitochondrion	75.44	72.87
Solyc12g006470.1.1	Tomato	extracellular, nucleus	65.03	72.27
KRH29085	Soybean	cytosol	75.25	72.26
PGSC0003DMT400062385	Potato	cytosol, peroxisome, plastid	43.22	71.9
AT3G22200.2	Thale cress	mitochondrion	72.1	71.54
Bra031335.1-P	Field mustard	mitochondrion	69.16	70.12
Bra031334.1-P	Field mustard	cytosol	23.38	56.4
CDY10621	Canola	extracellular, plastid	25.34	54.66
EER91172	Sorghum	mitochondrion	22.99	24.95
EES17651	Sorghum	plastid	21.61	23.61
KXG40078	Sorghum	mitochondrion	22.2	23.59
EER94889	Sorghum	mitochondrion	20.83	22.8
EES19688	Sorghum	mitochondrion	21.22	22.55
KXG22248	Sorghum	plastid	19.84	21.35

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.2.2.1	EntrezGene:8071169	InterPro:Aminotrans_3	UniProt:C5YII6
EnsemblPlants:EES14702	ProteinID:EES14702	ProteinID:EES14702.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	PFAM:PF00202
PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR42684	PANTHER:PTHR42684:SF2	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	EnsemblPlantsGene:SORBI_3007G074500	SUPFAM:SSF53383	unigene:Sbi.2749	UniParc:UPI0001A87E39	RefSeq:XP_002445207.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:8482144..8488779

Molecular Weight (calculated)

55878.1 Da

IEP (calculated)

7.126

GRAVY (calculated)

-0.121

Length

509 amino acids

Sequence
(BLAST)

001: MIAQGLRRSS AASSQVSRLV KYIASAGRLQ GGHSFSESPA RCYSSEPSLQ ATEENGFKGH SMLAPFTAGW QSTDLHPLVI ERSEGSYVYD INGKKYIDAL
101: AGLWCTALGG NEPRLVKAAT EQLHKLPFYH SFWNRTTKPS LDLANEILSM FTAREMGKVF FTNSGSEAND SQVKLVWYYN NALGRPDKKK FIARSKSYHG
201: STLIAASLSG LPALHQKFDL PAPFVLHTDC PHYWRFCLPD ETEEEFSTRL ANNLENLILK EGPETIAAFI AEPVMGAGGV ILPPKTYFEK IQAVLKKYDI
301: LLIADEVITA FGRLGTMFGC DMYNIKPDLV SIAKALSSAY MPIGAILVSP EVTDVIYSQS NKLGSFAHGF TYSGHPVSCA VAVETLKIYK ERNIIEHVNK
401: IAPRFQEGIK AFSGSPIVGE IRGVGLILGT EFVDNKSPND PFPAEWGVGS IFGAECEKRG MLIRVAGDSI MLSPPLIMTP NEVEEIISKF GDALKATEER
501: IGELKSRKN

Best Arabidopsis Sequence Match ( AT3G22200.1 )
(BLAST)

001: MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA
101: LGGNEPRLVS AAVEQLNTLP FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE KKKFIARKKS YHGSTLISAS
201: LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV
301: ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD
401: GVKAFASGSP IIGETRGTGL ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL ISIYGKALKA TEEKVKELKA
501: QHKK

Arabidopsis Description

POP2Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:TAIR;Acc:AT3G22200]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.