CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU92006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63570.1	OQU92006	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038547_P001	Maize	plastid	96.62	96.41
Os08t0532200-01	Rice	plastid	93.23	92.26
TraesCS7A01G260800.2	Wheat	plastid	90.49	90.68
TraesCS7D01G261800.1	Wheat	plastid	90.06	90.25
TraesCS7B01G158800.1	Wheat	plastid	89.43	89.62
HORVU7Hr1G054380.1	Barley	cytosol, peroxisome, plastid	90.27	83.24
TraesCS7D01G262000.1	Wheat	mitochondrion	57.72	82.23
HORVU7Hr1G054360.1	Barley	plastid	36.15	81.04
GSMUA_Achr6P07940_001	Banana	plastid	80.55	80.38
KRH51376	Soybean	plastid	77.38	78.54
CDY62883	Canola	plastid	78.22	78.22
CDY41519	Canola	plastid	78.22	78.22
AT3G48730.1	Thale cress	plastid	78.01	78.18
Bra038646.1-P	Field mustard	plastid	78.01	78.01
KRH60678	Soybean	nucleus	77.38	77.87
Bra035836.1-P	Field mustard	plastid	77.8	77.8
PGSC0003DMT400082447	Potato	cytosol	79.07	77.75
Solyc04g009200.2.1	Tomato	plastid	78.86	77.39
CDX81186	Canola	plastid	77.38	77.38
CDY16715	Canola	plastid	77.38	77.38
AT5G63570.1	Thale cress	plastid	77.38	77.22
VIT_17s0000g00900.t01	Wine grape	plastid	76.96	76.96
KRH17479	Soybean	plastid	52.22	59.52
EER91172	Sorghum	mitochondrion	23.04	23.24
EER94889	Sorghum	mitochondrion	22.2	22.58
EES19688	Sorghum	mitochondrion	22.83	22.55
EES17651	Sorghum	plastid	21.35	21.67
KXG40078	Sorghum	mitochondrion	21.78	21.5
EES14702	Sorghum	mitochondrion	21.35	19.84
EES11419	Sorghum	mitochondrion	21.35	19.77

Protein Annotations

KEGG:00860+5.4.3.8	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:4pyrrol_synth_GluAld_NH2Trfase	MapMan:7.12.1.4	UniProt:A0A1B6P988
InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008483	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	GO:GO:0033014
GO:GO:0042286	InterPro:IPR015421	InterPro:IPR015422	EnsemblPlants:KXG22248	ProteinID:KXG22248	ProteinID:KXG22248.1
HAMAP:MF_00375	PFAM:PF00202	ScanProsite:PS00600	PANTHER:PTHR43713	PANTHER:PTHR43713:SF2	MetaCyc:PWY-5188
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	EnsemblPlantsGene:SORBI_3009G180800	SUPFAM:SSF53383	TIGRFAMs:TIGR00713
UniParc:UPI00081ACC64	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:53494575..53498397

Molecular Weight (calculated)

50105.2 Da

IEP (calculated)

6.612

GRAVY (calculated)

-0.021

Length

473 amino acids

Sequence
(BLAST)

001: MAGAAAAAVA SGISARPAAP RRASTGRRAR LSVARAAISL EKGEKAYTVQ KSEEIFNAAK ELMPGGVNSP VRAFKSVGGQ PIVFDSVKGS RMWDVDGNEY
101: IDYVGSWGPA IIGHADDEVN AALIETLKKG TSFGAPCLLE NVLAEMVISA VPSIEMVRFV NSGTEACMGA LRLVRAFTGR EKIVKFEGCY HGHADSFLVK
201: AGSGVATLGL PDSPGVPKGA TYETLTAPYN DAEAVKKLFE ENKGEIAAVF LEAVVGNAGF IPPQPGFLNA LRDLTKHDGA LLVFDEVMTG FRLAYGGAQE
301: YFGITPDVTT LGKIIGGGLP VGAYGGRRDI MEMVAPAGPM YQAGTLSGNP LAMTAGIHTL KRLTEPGTYE YLDKITGELV RGILDVGAKT GHEMCGGHIR
401: GMFGFFFTGG PVHNFGDAKK SDTEKFGRFY RGMLEEGVYL APSQFEAGFT SLAHTSQDIE KTIEAAEKVL KRI

Best Arabidopsis Sequence Match ( AT3G48730.1 )
(BLAST)

001: MAATLTGSGI ALGFSCSAKF SKRASSSSNR RCIKMSVSVE EKTKKFTLQK SEEAFNAAKN LMPGGVNSPV RAFKSVGGQP VVMDSAKGSR IRDIDGNEYI
101: DYVGSWGPAI IGHADDEVLA ALAETMKKGT SFGAPCLLEN VLAEMVISAV PSIEMVRFVN SGTEACMGVL RLARAFTGKQ KFIKFEGCYH GHANSFLVKA
201: GSGVATLGLP DSPGVPKAAT SDTLTAPYND IAAVEKLFEA NKGEIAAIIL EPVVGNSGFI TPKPEFIEGI RRITKDNGAL LIFDEVMTGF RLAYGGAQEY
301: FGITPDLTTL GKIIGGGLPV GAYGGRRDIM EMVAPAGPMY QAGTLSGNPL AMTAGIHTLK RLSQPGTYEY LDKITKELTN GILEAGKKTG HAMCGGYISG
401: MFGFFFTEGP VYDFSDAKKS DTEKFGKFFR GMLEEGVYLA PSQFEAGFTS LAHTSEDIQF TIAAAEKVLS RL

Arabidopsis Description

GSA2Glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42522]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.