CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400082447	Potato	cytosol	66.27	57.17
Solyc04g009200.2.1	Tomato	plastid	65.78	56.64
KRH51376	Soybean	plastid	63.37	56.44
KRH60678	Soybean	nucleus	62.89	55.53
TraesCS7D01G261800.1	Wheat	plastid	59.52	52.33
KXG22248	Sorghum	plastid	59.52	52.22
TraesCS7B01G158800.1	Wheat	plastid	59.28	52.12
TraesCS7A01G260800.2	Wheat	plastid	59.28	52.12
Zm00001d038547_P001	Maize	plastid	59.52	52.11
GSMUA_Achr6P07940_001	Banana	plastid	59.04	51.69
Os08t0532200-01	Rice	plastid	58.8	51.05
TraesCS7D01G262000.1	Wheat	mitochondrion	39.28	49.1
HORVU7Hr1G054360.1	Barley	plastid	24.58	48.34
HORVU7Hr1G054380.1	Barley	cytosol, peroxisome, plastid	59.52	48.15
KRH58670	Soybean	mitochondrion	22.17	19.62
KRH42566	Soybean	mitochondrion	21.93	19.49
KRH45041	Soybean	extracellular, mitochondrion	6.27	17.45
KRH76075	Soybean	mitochondrion	19.04	16.63
KRH24110	Soybean	mitochondrion	20.48	16.57
KRH65497	Soybean	mitochondrion	18.8	16.42
KRH48868	Soybean	nucleus	18.31	16.27
KRH35638	Soybean	cytosol	18.07	16.2
KRH00394	Soybean	mitochondrion	18.8	16.18
KRH29085	Soybean	cytosol	20.48	16.04
KRH43286	Soybean	mitochondrion	17.83	15.58
KRH59427	Soybean	mitochondrion	17.83	15.51
KRH31231	Soybean	mitochondrion	17.59	15.43
KRG97644	Soybean	mitochondrion	13.25	14.14
KRH04754	Soybean	cytosol	4.34	13.24

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:35.1	EMBL:ACUP02009096	InterPro:Aminotrans_3	EnsemblPlantsGene:GLYMA_14G221900
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008483	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:K7M8I7
EnsemblPlants:KRH17479	ProteinID:KRH17479	ProteinID:KRH17479.1	PFAM:PF00202	PANTHER:PTHR43713	PANTHER:PTHR43713:SF2
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TMHMM:TMhelix	UniParc:UPI000294A846

Description

hypothetical protein

Coordinates

chr14:-:48680375..48683207

Molecular Weight (calculated)

45377.8 Da

IEP (calculated)

7.871

GRAVY (calculated)

0.223

Length

415 amino acids

Sequence
(BLAST)

001: MTNHTYPALH SSRIQASVHH NTNTDFSLRN SLQAFTLSMD LMPGGVNSPV RAFKSVGGQP IVIDSVKGSR MWDITLITIR KMICETNELC RFKTKILIMH
101: CAMEIMAWLL FSVVLATLAE TMKKGTSVGA PCLLENTLAE MVISAVPSIE MIRSVNSGTE ACMGALRLAR AFTGKQKIIK FEGCSHAMLI LFLLRQLTSN
201: TLTALFNDIL AIEKLFENHK GEIAALILEP AVGNSGFIVP KLEFLDTIRK IIKENNALLI FDEVMTGFQL SYGGAQEYFG IVPDLKTLGN IIVSGLPVGA
301: YGGRRNIMKM ADTLSGNPLA MAAGIEAQKL IKEAGTYEYL DEVTGELVQG ILQVGKRSGH SFDLAKFASF YRGMLEQGVY FASSQFEAGF TSLAHTTEDI
401: KMTIAAAERV LRQIG

Best Arabidopsis Sequence Match ( AT5G63570.1 )
(BLAST)

001: MSATLTGSGT ALGFSCSSKI SKRVSSSPAS NRCCIKMSVS VDEKKKSFSL QKSEEAFNAA KNLMPGGVNS PVRAFKSVGG QPVLIDSVKG SKMWDIDGNE
101: YIDYVGSWGP AIIGHADDEV LAALAETMKK GTSFGAPCLL ENVLAEMVIS AVPSIEMVRF VNSGTEACMG VLRLARAFTN KEKFIKFEGC YHGHANAFLV
201: KAGSGVATLG LPDSPGVPKA ATSDTLTAPY NDLEAVEKLF AAHKGEISAV ILEPVVGNSG FIPPTPEFIN GLRQLTKDNG VLLIFDEVMT GFRLAYGGAQ
301: EYFGITPDLT TLGKIIGGGL PVGAYGGRRD IMEMVAPAGP MYQAGTLSGN PLAMTAGIHT LKRLKQAGTY EYLDKITKEL TNGILEAGKK TGHPMCGGYI
401: SGMFGFFFAE GPVYNFADSK KSDTEKFGRF FRGMLEEGVY FAPSQFEAGF TSLAHTPEDI QLTIAAAERV LSRI

Arabidopsis Description

GSA1Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42799]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.