CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
peroxisome 2

Predictors

GFP

MS/MS

Papers

mitochondrion: 27780359

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59427	Soybean	mitochondrion	96.21	95.81
GSMUA_Achr10P...	Banana	peroxisome	73.26	82.46
VIT_07s0031g01330.t01	Wine grape	mitochondrion	80.84	81.36
CDX90347	Canola	mitochondrion	81.47	81.3
CDY63451	Canola	mitochondrion	80.84	80.67
AT4G39660.1	Thale cress	mitochondrion	80.63	80.46
CDY42643	Canola	mitochondrion	80.63	80.46
PGSC0003DMT400033328	Potato	extracellular	80.0	80.34
KRH31231	Soybean	mitochondrion	80.0	80.34
CDY41995	Canola	mitochondrion	79.79	79.62
Bra011843.1-P	Field mustard	mitochondrion	79.79	79.62
Solyc04g054310.2.1	Tomato	extracellular, plastid	78.74	79.07
Zm00001d027861_P001	Maize	mitochondrion	76.0	75.52
KXG40078	Sorghum	mitochondrion	76.0	75.37
HORVU4Hr1G075360.5	Barley	mitochondrion	75.37	74.74
TraesCS4D01G286900.1	Wheat	mitochondrion	75.16	74.53
TraesCS4A01G015900.1	Wheat	mitochondrion	75.16	74.53
TraesCS4B01G288100.1	Wheat	mitochondrion	74.74	74.11
KRG97644	Soybean	mitochondrion	59.37	72.49
Os03t0171900-01	Rice	mitochondrion	74.11	72.43
KRH76075	Soybean	mitochondrion	59.79	59.79
KRH65497	Soybean	mitochondrion	59.79	59.79
KRH00394	Soybean	mitochondrion	59.79	58.92
Bra010671.1-P	Field mustard	mitochondrion	79.37	42.84
KRH45041	Soybean	extracellular, mitochondrion	9.05	28.86
KRH04754	Soybean	cytosol	7.79	27.21
KRH48868	Soybean	nucleus	26.53	26.98
KRH35638	Soybean	cytosol	26.11	26.78
KRH58670	Soybean	mitochondrion	26.32	26.65
KRH42566	Soybean	mitochondrion	25.68	26.12
KRH24110	Soybean	mitochondrion	24.21	22.42
KRH51376	Soybean	plastid	21.47	21.89
KRH60678	Soybean	nucleus	21.47	21.7
KRH29085	Soybean	cytosol	23.58	21.13
KRH17479	Soybean	plastid	15.58	17.83

Protein Annotations

EntrezGene:100780526	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	EMBL:ACUP02004851	InterPro:Aminotrans_3
EnsemblPlantsGene:GLYMA_08G140200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008453	GO:GO:0008483
GO:GO:0016740	GO:GO:0030170	GO:GO:0042802	UniProt:I1KT81	InterPro:IPR015421	InterPro:IPR015422
EnsemblPlants:KRH43286	ProteinID:KRH43286	ProteinID:KRH43286.1	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600
PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
UniParc:UPI0001CAB3E4	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:10725194..10729231

Molecular Weight (calculated)

51364.1 Da

IEP (calculated)

7.903

GRAVY (calculated)

-0.032

Length

475 amino acids

Sequence
(BLAST)

001: MAAMQRPLKR TIAIAKLRAC FSSLRPAAAA DIVASPPPQL PPFDHQPHPY NGPFADEVLA KRKTFLGPSV FHYYKKPLNI VEGKMQYLYD DSGRRYLDAF
101: AGIVTVSCGH CHPEILNAIT EQSKLLQHAT TIYLHHTIGD FAESLAAKMP GNLKVVYFVN SGSEANELAM MMARLYTGSL GMISLRNAYH GGSSSTLGLT
201: ALNTWKYPIP EGHVHHVMNP DPYRGAFGAD AASYANDVQD HIDYGTSGKV AGFIAETMQG VGGAVELAPG YLKLVYDIIH KAGGVCIADE VQTGFGRTGS
301: HYWGFETQGV IPDIVTMAKG IGNGLPLGAV VTTPEIASVL AQKIQFNTFG GNPVCSAGGL AVLRVLDKEK RQAHCADVGS HLLERLRFLM ERHDIIGNVR
401: GRGLMVGIEL VTDRDNKTPA KAETAVVFEK LRELGVLVGK GGLHGNVFRI KPPMCFSKDD ADFLVDALDY SLSKL

Best Arabidopsis Sequence Match ( AT4G39660.1 )
(BLAST)

001: MALQRQLLKR ATSDIYHRRA ISLLRTDFST SPSIADAPPH IPPFVHQPRP YKGPSADEVL QKRKKFLGPS LFHYYQKPLN IVEGKMQYLY DESGRRYLDA
101: FAGIVTVSCG HCHPDILNAI TEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSLYAKDVH DHIEYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYEIV RNAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LASKILFNTF GGNPVCSAGG LAVLNVIDKE KRQEHCAEVG SHLIQRLKDV QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETSVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Arabidopsis Description

AGT2Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940M2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.