CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90347	Canola	mitochondrion	99.16	99.16
CDY42643	Canola	mitochondrion	95.17	95.17
CDY41995	Canola	mitochondrion	94.54	94.54
AT4G39660.1	Thale cress	mitochondrion	90.97	90.97
GSMUA_Achr10P...	Banana	peroxisome	73.95	83.41
VIT_07s0031g01330.t01	Wine grape	mitochondrion	81.72	82.42
PGSC0003DMT400033328	Potato	extracellular	80.67	81.18
KRH43286	Soybean	mitochondrion	80.67	80.84
KRH59427	Soybean	mitochondrion	80.46	80.29
Solyc04g054310.2.1	Tomato	extracellular, plastid	79.62	80.13
KRH31231	Soybean	mitochondrion	78.15	78.65
Zm00001d027861_P001	Maize	mitochondrion	75.84	75.52
KXG40078	Sorghum	mitochondrion	75.84	75.37
HORVU4Hr1G075360.5	Barley	mitochondrion	75.21	74.74
TraesCS4A01G015900.1	Wheat	mitochondrion	75.21	74.74
TraesCS4D01G286900.1	Wheat	mitochondrion	74.79	74.32
TraesCS4B01G288100.1	Wheat	mitochondrion	74.58	74.11
KRG97644	Soybean	mitochondrion	59.87	73.26
Os03t0171900-01	Rice	mitochondrion	74.79	73.25
CDY61533	Canola	peroxisome	26.68	67.91
CDY14465	Canola	cytosol	54.41	60.94
CDY54421	Canola	mitochondrion	61.34	60.71
CDY18386	Canola	mitochondrion	29.62	60.52
CDY00650	Canola	mitochondrion	59.24	60.0
CDY54458	Canola	mitochondrion	59.66	59.92
CDY00651	Canola	mitochondrion	59.03	59.79
CDX73944	Canola	mitochondrion	58.82	59.57
CDY66720	Canola	mitochondrion	60.08	58.13
CDY61531	Canola	mitochondrion	23.95	54.29
Bra010671.1-P	Field mustard	mitochondrion	96.64	52.27
CDY71561	Canola	mitochondrion	23.53	50.45
CDY67620	Canola	mitochondrion, plastid	25.84	27.46
CDY37615	Canola	mitochondrion	25.63	27.23
CDY39963	Canola	mitochondrion	25.42	26.83
CDX87325	Canola	mitochondrion	25.42	26.83
CDY33459	Canola	mitochondrion	23.11	25.76
CDX77642	Canola	mitochondrion	22.69	25.35
CDY35151	Canola	mitochondrion	18.91	23.62
CDY58748	Canola	mitochondrion	23.95	22.89
CDY39506	Canola	mitochondrion	24.16	22.73
CDY37389	Canola	mitochondrion	23.53	22.4
CDY10619	Canola	mitochondrion	23.32	22.2
CDY10622	Canola	golgi	21.22	21.4
CDY68670	Canola	cytosol	19.33	20.63
CDY16715	Canola	plastid	20.38	20.51
CDX81186	Canola	plastid	20.38	20.51
CDY62883	Canola	plastid	20.17	20.3
CDY41519	Canola	plastid	20.17	20.3
CDY03236	Canola	cytosol	15.55	19.22
CDY10621	Canola	extracellular, plastid	8.61	17.37

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	GO:A0A078JEX0	UniProt:A0A078JEX0	InterPro:Aminotrans_3
EnsemblPlants:CDY63451	ProteinID:CDY63451	ProteinID:CDY63451.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00039306001	InterPro:IPR015421	InterPro:IPR015422
PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0004EF161A	:	:

Description

BnaC03g76360DBnaC03g76360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEX0]

Coordinates

chrLK034301:-:18700..21093

Molecular Weight (calculated)

51991.5 Da

IEP (calculated)

7.924

GRAVY (calculated)

-0.137

Length

476 amino acids

Sequence
(BLAST)

001: MALQRQLLKR VVDRASTSSR IHSPAITFLR SDYSTSSPPQ LPPFDYQARP YNGPSADEVF QKRKKFLGPS LFHFYQKPLN IVEGKMQYLF DETGRRYLDA
101: FAGIVTVSCG HCHPDILNAI NEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELT MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSMYAKDVQ DHIDYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYDIV RKAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LATKIQFNTF GGNPVCSAGG LAVLNVIDKE RRQTHCAEVG SHLIQRLKDL QKKHDIIGDV
401: RGRGLMVGIE LVTDRQDKTP AKAETAVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Best Arabidopsis Sequence Match ( AT4G39660.1 )
(BLAST)

001: MALQRQLLKR ATSDIYHRRA ISLLRTDFST SPSIADAPPH IPPFVHQPRP YKGPSADEVL QKRKKFLGPS LFHYYQKPLN IVEGKMQYLY DESGRRYLDA
101: FAGIVTVSCG HCHPDILNAI TEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSLYAKDVH DHIEYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYEIV RNAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LASKILFNTF GGNPVCSAGG LAVLNVIDKE KRQEHCAEVG SHLIQRLKDV QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETSVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Arabidopsis Description

AGT2Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940M2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.