CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61533	Canola	peroxisome	38.35	87.17
CDY66720	Canola	mitochondrion	96.24	83.13
Bra000060.1-P	Field mustard	mitochondrion	92.0	82.14
CDY18386	Canola	mitochondrion	43.06	78.54
CDY54458	Canola	mitochondrion	86.59	77.64
CDY54421	Canola	mitochondrion	87.06	76.92
AT2G38400.2	Thale cress	mitochondrion	88.94	76.67
Os05t0475400-02	Rice	peroxisome	68.94	74.94
GSMUA_Achr5P08560_001	Banana	peroxisome	72.47	70.64
CDY61531	Canola	mitochondrion	34.12	69.05
GSMUA_Achr8P17090_001	Banana	peroxisome	71.06	67.56
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	75.76	67.51
VIT_06s0004g07660.t01	Wine grape	mitochondrion	72.47	64.44
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	72.24	64.23
KRH76075	Soybean	mitochondrion	71.76	64.21
EER94889	Sorghum	mitochondrion	70.12	64.09
GSMUA_Achr6P32610_001	Banana	mitochondrion	71.76	64.08
TraesCS1D01G292100.1	Wheat	mitochondrion	71.76	63.94
EES19688	Sorghum	mitochondrion	72.0	63.88
Solyc10g076250.1.1	Tomato	mitochondrion	71.76	63.81
TraesCS1B01G308900.1	Wheat	mitochondrion	71.29	63.52
KRH65497	Soybean	mitochondrion	70.82	63.37
Zm00001d038460_P007	Maize	plasma membrane	69.88	63.33
TraesCS1A01G299100.1	Wheat	mitochondrion	71.06	63.31
TraesCS4D01G170300.1	Wheat	mitochondrion	68.24	63.18
TraesCS4A01G137000.1	Wheat	mitochondrion	68.0	62.96
CDX73944	Canola	mitochondrion	69.41	62.77
CDY00650	Canola	mitochondrion	69.41	62.77
TraesCS4B01G167100.1	Wheat	mitochondrion	67.76	62.75
KRH00394	Soybean	mitochondrion	71.06	62.66
CDY00651	Canola	mitochondrion	69.18	62.55
Os03t0338000-01	Rice	peroxisome	70.12	61.57
HORVU1Hr1G070220.2	Barley	mitochondrion	71.06	61.13
Zm00001d029083_P001	Maize	extracellular	64.24	60.4
Zm00001d038453_P003	Maize	mitochondrion	70.82	59.14
Zm00001d043951_P001	Maize	cytosol	29.88	57.99
GSMUA_Achr1P17230_001	Banana	peroxisome	29.41	55.31
CDX90347	Canola	mitochondrion	61.18	54.62
CDY63451	Canola	mitochondrion	60.94	54.41
CDY42643	Canola	mitochondrion	60.94	54.41
CDY41995	Canola	mitochondrion	60.71	54.2
CDY71561	Canola	mitochondrion	24.71	47.3
CDY37615	Canola	mitochondrion	27.53	26.12
CDY67620	Canola	mitochondrion, plastid	27.53	26.12
CDY39963	Canola	mitochondrion	27.29	25.72
CDX87325	Canola	mitochondrion	27.29	25.72
CDX77642	Canola	mitochondrion	24.47	24.41
CDY33459	Canola	mitochondrion	24.24	24.12
CDY35151	Canola	mitochondrion	20.94	23.36
CDY68670	Canola	cytosol	23.06	21.97
CDY58748	Canola	mitochondrion	24.71	21.08
CDY37389	Canola	mitochondrion	24.71	21.0
CDY10619	Canola	mitochondrion	24.71	21.0
CDY10622	Canola	golgi	23.29	20.97
CDY39506	Canola	mitochondrion	24.47	20.55
CDY03236	Canola	cytosol	17.88	19.74
CDY10621	Canola	extracellular, plastid	10.82	19.49
CDY62883	Canola	plastid	21.18	19.03
CDY41519	Canola	plastid	21.18	19.03
CDX81186	Canola	plastid	20.94	18.82
CDY16715	Canola	plastid	20.71	18.6

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	GO:A0A078FJ45	UniProt:A0A078FJ45	InterPro:Aminotrans_3
EnsemblPlants:CDY14465	ProteinID:CDY14465	ProteinID:CDY14465.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00079142001	InterPro:IPR015421	InterPro:IPR015422
PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0004EF29FF	:	:

Description

BnaC03g21300DBnaC03g21300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJ45]

Coordinates

chrLK032043:-:472507..479934

Molecular Weight (calculated)

46335.1 Da

IEP (calculated)

6.784

GRAVY (calculated)

0.046

Length

425 amino acids

Sequence
(BLAST)

001: MPLLFRKPLN IVDGKMQYLF DESGRRYLDA FAGIAVVNCG HCHPDVVEPV INQIKRLQHP TVMYLNHAIA DFSEALASKL PGDLKVVFFT NSGTEANELA
101: LMMAKLYTGC QDIVSIRNGY HGNAAGTMGA TGHSLWKFNV VQTGTHHALN PDPYRGVFGS DGEKYARDVQ DLIQYGTTGH IAGFICEAIQ GVGGMVELAP
201: GYMSAAYDIV KKAGGLFIAD EVQSGFARTG NFWGFEAHNV VPDIVTMAKG IGNGFPLGAV VTTPEIAGVL TRRCYFNTFG GNAVATTAGL AVLNVIEKEK
301: LQENASMVGS YLKGKLSQLK EKHEIIGDVR GRGLMLGIEL VSDRKLKTPA TAETLHIMDQ MKELGVLVGK GGYFGNVFRI TPPLCFTKED ADYLLWLSYA
401: CYFTFEQPKM IDEPTSRCFS IILFS

Best Arabidopsis Sequence Match ( AT2G38400.2 )
(BLAST)

001: MQRFAAKRSV QNISVSLWRR CISSTSQAAT ASVKDSDEFQ ARLPPFAYTP PPYTGPSADV ILSKRKEFLS PSMFCLYRKP LNIVDGKMQY LFDESGRRYL
101: DAFAGIAVVN CGHCHPDVVE PVINQIKRLQ HPTVLYLNHA IADFSEALAS KLPGDLKVVF FTNSGTEANE LALMMAKLYT GCQDIVAVRN GYHGNAAATM
201: GATGQSMWKF NVVQNSVHHA LNPDPYRGVF GSDGEKYAKD LQDLIQYGTT GHIAGFICEA IQGVGGIVEL APGYLSAAYD TVKKAGGLFI ADEVQSGFAR
301: TGNFWGFEAH NVVPDIVTMA KGIGNGFPLG AVVTTPEIAG VLTRRSYFNT FGGNSVSTTA GLAVLNVIEK EKLQENAAMV GSYLKEKLTQ LKEKHEIIGD
401: VRGRGLMLGV ELVSDRKLKT PATAETLHIM DQMKELGVLI GKGGYFGNVF RITPPLCFTK DDAVVVKNAC NYAMNDYKID EPTSRCFSIT MFS

Arabidopsis Description

AGT3Alanine:glyoxylate aminotransferase 3 [Source:UniProtKB/TrEMBL;Acc:F4ISY3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.