Factsheet for TraesCS1A01G299100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G308900.1	Wheat	mitochondrion	99.58	99.58
TraesCS1D01G292100.1	Wheat	mitochondrion	99.37	99.37
Os05t0475400-02	Rice	peroxisome	76.31	93.09
HORVU1Hr1G070220.2	Barley	mitochondrion	95.18	91.9
EES19688	Sorghum	mitochondrion	91.4	91.02
Zm00001d038460_P007	Maize	plasma membrane	88.05	89.55
Zm00001d038453_P003	Maize	mitochondrion	90.57	84.87
TraesCS4A01G137000.1	Wheat	mitochondrion	76.1	79.08
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	75.89	75.89
VIT_06s0004g07660.t01	Wine grape	mitochondrion	75.05	74.9
Solyc10g076250.1.1	Tomato	mitochondrion	73.17	73.01
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	72.54	72.38
CDY61533	Canola	peroxisome	28.3	72.19
KRH76075	Soybean	mitochondrion	71.7	72.0
KRH65497	Soybean	mitochondrion	71.07	71.37
CDY14465	Canola	cytosol	63.31	71.06
AT3G08860.1	Thale cress	mitochondrion	71.28	70.69
KRH00394	Soybean	mitochondrion	71.28	70.54
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	67.51	70.31
Bra000060.1-P	Field mustard	mitochondrion	69.6	69.75
CDX73944	Canola	mitochondrion	68.55	69.57
CDY00650	Canola	mitochondrion	68.55	69.57
CDY00651	Canola	mitochondrion	68.13	69.15
Bra017119.1-P	Field mustard	mitochondrion	69.39	69.1
CDY54421	Canola	mitochondrion	69.39	68.81
CDY54458	Canola	mitochondrion	68.34	68.78
AT2G38400.2	Thale cress	mitochondrion	71.07	68.76
Bra005111.1-P	Field mustard	mitochondrion	67.71	68.14
CDY66720	Canola	mitochondrion	70.23	68.09
CDY61531	Canola	mitochondrion	29.14	66.19
CDY18386	Canola	mitochondrion	32.29	66.09
GSMUA_Achr1P17230_001	Banana	peroxisome	31.03	65.49
CDY71561	Canola	mitochondrion	29.35	63.06
TraesCS4A01G015900.1	Wheat	mitochondrion	60.8	60.54
TraesCS1A01G072200.1	Wheat	plastid	26.42	27.57
TraesCS5A01G375000.1	Wheat	mitochondrion	24.32	24.58
TraesCS2A01G421400.1	Wheat	mitochondrion	24.32	22.7
TraesCS7A01G373400.1	Wheat	plastid	21.17	21.49
TraesCS7A01G260800.2	Wheat	plastid	20.96	21.19
TraesCS7A01G334200.1	Wheat	mitochondrion	22.22	20.54

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422
PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	EnsemblPlantsGene:TraesCS1A01G299100	EnsemblPlants:TraesCS1A01G299100.1	TIGR:cd00610
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:493920013..493923295

Molecular Weight (calculated)

51148.6 Da

IEP (calculated)

8.216

GRAVY (calculated)

-0.033

Length

477 amino acids

Sequence
(BLAST)

001: MQRLASSRRL LRAALAPGRA HSSLSAAAVA AAPENGAGAP KMPPFAYTPP PYDGPRVAEI AQKRAQFLSP SLFHFYDRPL NIVDGKMQYL FDEDGRRYLD
101: AFGGIATVCC GHCHPDVIEA IVNQAKKIQH STVLYLNHAI ADFAEALAAK MPGDLKVVFF TNSGTEANEL ALMIARLYTG SHDIISLRNG YHGNAAATMG
201: ATAQANWKFN VVQTGVHHAL NPDPYRGAFG SDGEKYARDI QETIDYGTTG RVAGFISEAI QGVGGIVELA PGYLPAAYDM VRKAGGLCIA DEVQAGVART
301: GSHFWGFEGQ GVIPDIVTMA KGIGNGIPIG AVVTTPEIAK VLTRRSYFNT FGGNPVSTAA GHAVLKVLEK EKLQENAFVV GSYLKEKLNA LKEKHDIIGD
401: VRGKGLLLGV ELVTDRQKKT PAKAEIAQVM NHMKDMGVLV GKGGFFGNVF RVTPPLCFSK EDSDFMIEVM DIALSKL

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.