CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 8
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038460_P007	Maize	plasma membrane	94.15	96.16
Os05t0475400-02	Rice	peroxisome	77.87	95.4
TraesCS1B01G308900.1	Wheat	mitochondrion	91.44	91.82
TraesCS1D01G292100.1	Wheat	mitochondrion	91.23	91.61
TraesCS1A01G299100.1	Wheat	mitochondrion	91.02	91.4
Zm00001d038453_P003	Maize	mitochondrion	97.08	91.36
HORVU1Hr1G070220.2	Barley	mitochondrion	88.73	86.03
EER94889	Sorghum	mitochondrion	79.54	81.94
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	77.24	77.57
VIT_06s0004g07660.t01	Wine grape	mitochondrion	74.95	75.1
KRH76075	Soybean	mitochondrion	74.32	74.95
Solyc10g076250.1.1	Tomato	mitochondrion	73.9	74.06
KRH65497	Soybean	mitochondrion	73.28	73.89
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	73.28	73.43
CDY61533	Canola	peroxisome	28.18	72.19
CDY14465	Canola	cytosol	63.88	72.0
KRH00394	Soybean	mitochondrion	72.44	71.99
AT3G08860.1	Thale cress	mitochondrion	72.03	71.73
CDY00650	Canola	mitochondrion	70.35	71.7
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	68.48	71.62
CDY00651	Canola	mitochondrion	69.94	71.28
CDX73944	Canola	mitochondrion	69.94	71.28
Bra000060.1-P	Field mustard	mitochondrion	70.56	71.01
Bra017119.1-P	Field mustard	mitochondrion	70.35	70.35
CDY54458	Canola	mitochondrion	69.1	69.83
CDY54421	Canola	mitochondrion	69.94	69.65
AT2G38400.2	Thale cress	mitochondrion	71.4	69.37
CDY66720	Canola	mitochondrion	71.19	69.31
Bra005111.1-P	Field mustard	mitochondrion	68.48	69.2
CDY61531	Canola	mitochondrion	30.27	69.05
CDY18386	Canola	mitochondrion	32.36	66.52
GSMUA_Achr1P17230_001	Banana	peroxisome	31.32	66.37
CDY71561	Canola	mitochondrion	30.06	64.86
KXG40078	Sorghum	mitochondrion	61.38	61.38
EES17651	Sorghum	plastid	26.3	27.04
EER91172	Sorghum	mitochondrion	25.47	26.01
KXG22248	Sorghum	plastid	22.55	22.83
EES11419	Sorghum	mitochondrion	23.17	21.72
EES14702	Sorghum	mitochondrion	22.55	21.22

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	EntrezGene:8064129	InterPro:Aminotrans_3	UniProt:C5YZR0
EnsemblPlants:EES19688	ProteinID:EES19688	ProteinID:EES19688.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0008453	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	GO:GO:0042802	InterPro:IPR015421
InterPro:IPR015422	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	EnsemblPlantsGene:SORBI_3009G172500	SUPFAM:SSF53383	unigene:Sbi.163
UniParc:UPI0001A88EDA	RefSeq:XP_002441258.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:52753450..52757465

Molecular Weight (calculated)

51750.1 Da

IEP (calculated)

7.202

GRAVY (calculated)

-0.074

Length

479 amino acids

Sequence
(BLAST)

001: MQRLASSRRL LQAALVPARA NSSLSAAAVA APAPENGADA VPKMPAFDYT PPPYDGPRAD EIFRKRAQFL SPSLFHFYDR PLNIVDGKKQ YLFDEDGRRY
101: LDAFGGIATV CCGHCHPDVV EAIVNQAKRI QHSTVLYLNH AIADFAEALA SKMPGDLKVV FFTNSGTEAN ELALMIARLY TGCNDIISLR NGYHGNAAGT
201: MGATAQSNWK FNVVQTGVHH ALNPDPYRGA FGSDGEKYAR DVQEIIEFGT TGRVGGFISE AIQGVGGIVE LAPGYLPVAY DMVRKAGGLC IADEVQAGVA
301: RTGSHFWGFE GHGVIPDIVT MAKGIGNGIP IGAVVTTPEI AQVLTRRSYF NTFGGNPVST AGGHAVLKVL EKEKLQENAF VVGSYLKEQL NKLKEKHEII
401: GDVRGKGFLL GVELVTDREK KTPAKAEISH VMNHMKDMGV LVGKGGFYGN VFRITPPLCF TKEDSDFFIE VMDIALSKL

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.