Factsheet for GSMUA_Achr1P17230_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61533	Canola	peroxisome	45.13	54.55
CDY18386	Canola	mitochondrion	44.25	42.92
Os05t0475400-02	Rice	peroxisome	65.04	37.6
GSMUA_Achr5P08560_001	Banana	peroxisome	71.24	36.93
GSMUA_Achr8P17090_001	Banana	peroxisome	68.58	34.68
GSMUA_Achr6P32610_001	Banana	mitochondrion	67.7	32.14
Zm00001d038460_P007	Maize	plasma membrane	65.49	31.56
EES19688	Sorghum	mitochondrion	66.37	31.32
TraesCS1B01G308900.1	Wheat	mitochondrion	65.49	31.03
TraesCS1A01G299100.1	Wheat	mitochondrion	65.49	31.03
TraesCS1D01G292100.1	Wheat	mitochondrion	65.04	30.82
VIT_06s0004g07660.t01	Wine grape	mitochondrion	63.72	30.13
KRH76075	Soybean	mitochondrion	63.27	30.11
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	63.27	29.98
KRH65497	Soybean	mitochondrion	62.83	29.89
CDY14465	Canola	cytosol	55.31	29.41
GSMUA_Achr10P...	Banana	peroxisome	54.87	29.38
Zm00001d038453_P003	Maize	mitochondrion	65.93	29.27
AT3G08860.1	Thale cress	mitochondrion	61.95	29.11
CDX73944	Canola	mitochondrion	59.29	28.51
Solyc10g076250.1.1	Tomato	mitochondrion	60.18	28.45
CDY00650	Canola	mitochondrion	58.85	28.3
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	59.73	28.24
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	57.08	28.17
CDY00651	Canola	mitochondrion	58.41	28.09
HORVU1Hr1G070220.2	Barley	mitochondrion	61.06	27.94
KRH00394	Soybean	mitochondrion	59.29	27.8
CDY54421	Canola	mitochondrion	57.96	27.23
CDY54458	Canola	mitochondrion	57.08	27.22
Bra017119.1-P	Field mustard	mitochondrion	57.52	27.14
Bra005111.1-P	Field mustard	mitochondrion	56.64	27.0
AT2G38400.2	Thale cress	mitochondrion	57.96	26.57
Bra000060.1-P	Field mustard	mitochondrion	55.75	26.47
CDY66720	Canola	mitochondrion	56.19	25.81
GSMUA_Achr9P04450_001	Banana	cytosol	24.34	13.72
GSMUA_Achr11P...	Banana	cytosol	21.24	13.08
GSMUA_Achr10P...	Banana	mitochondrion	25.22	12.03
Zm00001d043951_P001	Maize	cytosol	11.5	11.87
GSMUA_Achr5P00340_001	Banana	mitochondrion	26.11	11.68
GSMUA_Achr6P07940_001	Banana	plastid	21.24	10.13
GSMUA_Achr5P28220_001	Banana	cytosol	8.85	8.23
CDY71561	Canola	mitochondrion	3.98	4.05
CDY61531	Canola	mitochondrion	3.54	3.81

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.2.6	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr1G17230_001	EnsemblPlants:GSMUA_Achr1P17230_001
EnsemblPlants:GSMUA_Achr1T17230_001	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0S0N1	PFAM:PF00202	PANTHER:PTHR11986
PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0002964D3C

Description

Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr1G17230_001]

Coordinates

chr1:+:12843137..12845524

Molecular Weight (calculated)

24759.6 Da

IEP (calculated)

7.596

GRAVY (calculated)

-0.215

Length

226 amino acids

Sequence
(BLAST)

001: MTPYSTDPYR LIDTHTKGVK VEIFGSDGEK YAKDVQEIIN FRTCERVAGF ISESKGELAS GYSPAVYNTL KEAGGLCIAD EVRAGFARTR SHFWGFEAHG
101: IVPDIPPSAL VTIPEIARVF ARRSYFSTFG GNPVSMAGDH PKGTQLKQKH HIIGDVRGRG LMLGVELVTD RRQKTPAKAQ VLPDMGVLVG QGGFYDNVLT
201: ETPPLCFSKD DSDFFVRVMD AALSKL

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.