Factsheet for GSMUA_Achr8P17090_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
mitochondrion 2
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P08560_001	Banana	peroxisome	85.91	88.07
GSMUA_Achr6P32610_001	Banana	mitochondrion	80.09	75.21
CDY61533	Canola	peroxisome	31.1	74.33
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	78.97	74.0
VIT_06s0004g07660.t01	Wine grape	mitochondrion	78.52	73.43
KRH76075	Soybean	mitochondrion	77.4	72.84
KRH65497	Soybean	mitochondrion	76.96	72.42
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	76.29	71.34
CDY14465	Canola	cytosol	67.56	71.06
Solyc10g076250.1.1	Tomato	mitochondrion	75.84	70.92
GSMUA_Achr1P17230_001	Banana	peroxisome	34.68	68.58
CDY54458	Canola	mitochondrion	71.81	67.72
Bra017119.1-P	Field mustard	mitochondrion	72.26	67.43
Bra000060.1-P	Field mustard	mitochondrion	71.59	67.23
KRH00394	Soybean	mitochondrion	72.48	67.22
CDY61531	Canola	mitochondrion	31.54	67.14
Bra005111.1-P	Field mustard	mitochondrion	70.92	66.88
CDX73944	Canola	mitochondrion	70.02	66.6
CDY54421	Canola	mitochondrion	71.59	66.53
CDY00650	Canola	mitochondrion	69.8	66.38
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	68.01	66.38
AT3G08860.1	Thale cress	mitochondrion	71.14	66.11
CDY00651	Canola	mitochondrion	69.35	65.96
CDY66720	Canola	mitochondrion	72.48	65.85
AT2G38400.2	Thale cress	mitochondrion	71.59	64.91
GSMUA_Achr10P...	Banana	peroxisome	60.4	63.98
CDY18386	Canola	mitochondrion	33.33	63.95
CDY71561	Canola	mitochondrion	28.19	56.76
GSMUA_Achr9P04450_001	Banana	cytosol	29.31	32.67
GSMUA_Achr11P...	Banana	cytosol	25.5	31.06
GSMUA_Achr5P28220_001	Banana	cytosol	16.11	29.63
GSMUA_Achr10P...	Banana	mitochondrion	28.19	26.58
GSMUA_Achr5P00340_001	Banana	mitochondrion	25.28	22.38
GSMUA_Achr6P07940_001	Banana	plastid	22.15	20.89

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr8G17090_001	EnsemblPlants:GSMUA_Achr8P17090_001
EnsemblPlants:GSMUA_Achr8T17090_001	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0TR62	PFAM:PF00202	PIRSF:PIRSF000521
ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI0002964E89	:	:	:	:

Description

Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr8G17090_001]

Coordinates

chr8:+:15908779..15911882

Molecular Weight (calculated)

48595.5 Da

IEP (calculated)

6.991

GRAVY (calculated)

-0.006

Length

447 amino acids

Sequence
(BLAST)

001: MPPFDYTPLP YLGPRAAEIV RKRSEFLSPS ISYLYKNPLN IVDGKMQYLF DEDGRRYLDA FGGIATVSCG HCHPDIVEAI INQTKRLQHP TVLYLNHAVA
101: DFAEALASKF PGDLKARTTR LLFSSLVVFF TNSGTEANEL AMMIARVYTG CHDIISVRNA YHGNAAGSMG ATAQSNWKFN VIQTGMHHAL NPDQYRGIFG
201: SAGEKYAKDV EEIIDFGTSG RVAGFISEAI QGVGGVMELA PGYLPAVYRT IKKAGGLFIA DEVQAGFART GSHFWGFEAH GVVPDIVTSA KGAGNGIPIG
301: AVVTTPEIAR VLTQRCYFNT FGGNPVCTAA GHAVLKVIEK ENLQENALVV GSYLKDQLKA LQDKHDIIGD VRGRGLMLGV ELVTDRQQKT PAKTEILHAM
401: ETMKDMGVLV GKGGFYGNVF RITPPLCFSK EDADFFLDVM DIALSKI

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.