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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000060.1-P Field mustard mitochondrion 86.41 89.5
CDY66720 Canola mitochondrion 88.84 89.02
CDY14465 Canola cytosol 76.67 88.94
CDY54458 Canola mitochondrion 83.37 86.71
Bra005111.1-P Field mustard mitochondrion 82.96 86.29
CDY54421 Canola mitochondrion 83.16 85.24
CDY61533 Canola peroxisome 32.25 85.03
CDY61531 Canola mitochondrion 36.11 84.76
Bra017119.1-P Field mustard mitochondrion 82.15 84.55
CDY18386 Canola mitochondrion 39.15 82.83
GSMUA_Achr5P08560_001 Banana peroxisome 68.15 77.06
Os05t0475400-02 Rice peroxisome 59.43 74.94
VIT_08s0058g00930.t01 Wine grape mitochondrion, peroxisome 72.41 74.84
PGSC0003DMT400030976 Potato mitochondrion, peroxisome 71.2 73.43
VIT_06s0004g07660.t01 Wine grape mitochondrion 70.79 73.01
Solyc10g076250.1.1 Tomato mitochondrion 70.18 72.38
GSMUA_Achr8P17090_001 Banana peroxisome 64.91 71.59
KRH76075 Soybean mitochondrion 68.97 71.58
TraesCS1B01G308900.1 Wheat mitochondrion 69.17 71.49
TraesCS1D01G292100.1 Wheat mitochondrion 69.17 71.49
EES19688 Sorghum mitochondrion 69.37 71.4
TraesCS1A01G299100.1 Wheat mitochondrion 68.76 71.07
KRH65497 Soybean mitochondrion 67.75 70.32
GSMUA_Achr6P32610_001 Banana mitochondrion 67.55 69.96
Zm00001d038460_P007 Maize plasma membrane 66.53 69.94
EER94889 Sorghum mitochondrion 65.11 69.03
TraesCS4A01G137000.1 Wheat mitochondrion 63.89 68.63
HORVU1Hr1G070220.2 Barley mitochondrion 68.56 68.42
TraesCS4B01G167100.1 Wheat mitochondrion 63.69 68.41
TraesCS4D01G170300.1 Wheat mitochondrion 63.69 68.41
KRH00394 Soybean mitochondrion 66.73 68.26
AT3G08860.1 Thale cress mitochondrion 66.53 68.19
Os03t0338000-01 Rice peroxisome 65.11 66.32
Zm00001d038453_P003 Maize mitochondrion 67.95 65.82
Zm00001d029083_P001 Maize extracellular 60.04 65.49
AT4G39660.1 Thale cress mitochondrion 57.61 59.66
Zm00001d043951_P001 Maize cytosol 25.76 57.99
GSMUA_Achr1P17230_001 Banana peroxisome 26.57 57.96
AT1G80600.1 Thale cress plastid 24.75 26.7
AT5G46180.1 Thale cress mitochondrion 24.54 25.47
AT3G22200.2 Thale cress mitochondrion 21.91 21.05
AT3G48730.1 Thale cress plastid 19.27 20.13
AT5G63570.1 Thale cress plastid 18.46 19.2
Protein Annotations
Gene3D:3.40.640.10Gene3D:3.90.1150.10MapMan:6.2.4.6EntrezGene:818421ProteinID:AEC09533.1Symbol:AGT3
ArrayExpress:AT2G38400EnsemblPlantsGene:AT2G38400RefSeq:AT2G38400TAIR:AT2G38400RefSeq:AT2G38400-TAIR-GEnsemblPlants:AT2G38400.2
TAIR:AT2G38400.2InterPro:Aminotrans_3Unigene:At.11529UniProt:F4ISY3GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008483GO:GO:0016740GO:GO:0030170InterPro:IPR015421InterPro:IPR015422
RefSeq:NP_001189701.1PFAM:PF00202PIRSF:PIRSF000521PO:PO:0000013PO:PO:0000037PO:PO:0000084
PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0009005
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281ScanProsite:PS00600
PANTHER:PTHR11986PANTHER:PTHR11986:SF77InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383
UniParc:UPI0001E92CAD:::::
Description
AGT3Alanine:glyoxylate aminotransferase 3 [Source:UniProtKB/TrEMBL;Acc:F4ISY3]
Coordinates
chr2:+:16083691..16086159
Molecular Weight (calculated)
53695.6 Da
IEP (calculated)
7.960
GRAVY (calculated)
-0.053
Length
493 amino acids
Sequence
(BLAST)
001: MQRFAAKRSV QNISVSLWRR CISSTSQAAT ASVKDSDEFQ ARLPPFAYTP PPYTGPSADV ILSKRKEFLS PSMFCLYRKP LNIVDGKMQY LFDESGRRYL
101: DAFAGIAVVN CGHCHPDVVE PVINQIKRLQ HPTVLYLNHA IADFSEALAS KLPGDLKVVF FTNSGTEANE LALMMAKLYT GCQDIVAVRN GYHGNAAATM
201: GATGQSMWKF NVVQNSVHHA LNPDPYRGVF GSDGEKYAKD LQDLIQYGTT GHIAGFICEA IQGVGGIVEL APGYLSAAYD TVKKAGGLFI ADEVQSGFAR
301: TGNFWGFEAH NVVPDIVTMA KGIGNGFPLG AVVTTPEIAG VLTRRSYFNT FGGNSVSTTA GLAVLNVIEK EKLQENAAMV GSYLKEKLTQ LKEKHEIIGD
401: VRGRGLMLGV ELVSDRKLKT PATAETLHIM DQMKELGVLI GKGGYFGNVF RITPPLCFTK DDAVVVKNAC NYAMNDYKID EPTSRCFSIT MFS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.