Factsheet for TraesCS4D01G170300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G137000.1	Wheat	mitochondrion	98.91	98.91
TraesCS4B01G167100.1	Wheat	mitochondrion	98.26	98.26
EER94889	Sorghum	mitochondrion	91.5	90.32
Zm00001d029083_P001	Maize	extracellular	84.53	85.84
Os03t0338000-01	Rice	peroxisome	89.54	84.92
TraesCS1D01G292100.1	Wheat	mitochondrion	78.87	75.89
GSMUA_Achr6P32610_001	Banana	mitochondrion	77.34	74.58
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	76.25	73.38
CDY61533	Canola	peroxisome	29.41	72.19
VIT_06s0004g07660.t01	Wine grape	mitochondrion	75.16	72.18
KRH76075	Soybean	mitochondrion	74.51	72.0
KRH00394	Soybean	mitochondrion	74.95	71.37
KRH65497	Soybean	mitochondrion	73.64	71.16
Solyc10g076250.1.1	Tomato	mitochondrion	73.42	70.5
PGSC0003DMT400030976	Potato	mitochondrion, peroxisome	73.42	70.5
AT3G08860.1	Thale cress	mitochondrion	72.98	69.65
CDY00650	Canola	mitochondrion	71.24	69.57
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	69.06	69.21
CDY00651	Canola	mitochondrion	70.81	69.15
CDX73944	Canola	mitochondrion	70.59	68.94
CDY14465	Canola	cytosol	63.18	68.24
CDY54458	Canola	mitochondrion	68.41	66.24
Bra005111.1-P	Field mustard	mitochondrion	67.97	65.82
Bra000060.1-P	Field mustard	mitochondrion	68.19	65.76
Bra017119.1-P	Field mustard	mitochondrion	68.41	65.55
CDY54421	Canola	mitochondrion	67.54	64.45
CDY66720	Canola	mitochondrion	68.63	64.02
AT2G38400.2	Thale cress	mitochondrion	68.41	63.69
CDY18386	Canola	mitochondrion	32.24	63.52
CDY61531	Canola	mitochondrion	28.76	62.86
TraesCS4D01G286900.1	Wheat	mitochondrion	62.96	60.33
CDY71561	Canola	mitochondrion	28.76	59.46
TraesCS1D01G074600.1	Wheat	plastid	27.45	27.39
TraesCS5D01G384500.1	Wheat	mitochondrion	25.27	24.52
TraesCS2D01G418400.2	Wheat	mitochondrion	24.62	22.11
TraesCS7D01G261800.1	Wheat	plastid	22.0	21.4
TraesCS7D01G262000.1	Wheat	mitochondrion	15.47	21.39
TraesCS7D01G341900.2	Wheat	mitochondrion	23.53	21.26

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422
PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	EnsemblPlantsGene:TraesCS4D01G170300	EnsemblPlants:TraesCS4D01G170300.1	TIGR:cd00610

Description

No Description!

Coordinates

chr4D:-:295848897..295851322

Molecular Weight (calculated)

49895.1 Da

IEP (calculated)

7.259

GRAVY (calculated)

-0.015

Length

459 amino acids

Sequence
(BLAST)

001: MLGARRSFSR LAAAVRTPVE VPRMPAFDHV PLPYDGPSAV EIARKRAEYL SPSLFHFYSK PLNIVEGKKQ YLYDEHGRRY LDAFAGIATV CCGHTHPDII
101: DAITAQANRL QHSTVLYLNH AIADFAEALA AKMPGDLKVV FFTNSGTEAN ELAIMMARLY TGSHDIISLR NSYHGNASGT MGATAQKNWK FNVVQSGVHH
201: AVNPDPYRGA FGSDGEKYAR DVKEIIEFGT TGHVAGFISE AIQGVGGIVE VAPGYLPLAY DAVRKAGGLC IADEVQAGFA RVGSHFWGFE THGVIPDIVT
301: MAKGIGNGIP LGAVVTTPEI AQVLTRRSYF NTFGGNPLCT AGGLAVLKVL DRERLQENAF IVGAYLKDRL RGLQEKHQII GDVRGTGFML GVELVTDRQL
401: KTPAKDEICQ AMEHMKDMGV LVGKGGFYGN VFRITPPLCF TKEDADFFVD VMDIALSKL

Best Arabidopsis Sequence Match ( AT3G08860.1 )
(BLAST)

001: MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR
101: RYLDAFGGIA TVSCGHCHPE VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR LYTGCNDIVS LRNSYHGNAA
201: ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG
301: FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE
401: LIGDVRGRGL MLGVEFVKDR DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK M

Arabidopsis Description

PYD4Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SR86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.