Factsheet for TraesCS7D01G262000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63570.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT5G63570.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT5G63570.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G261800.1	Wheat	plastid	88.25	62.08
TraesCS7B01G158800.1	Wheat	plastid	88.25	62.08
TraesCS7A01G260800.2	Wheat	plastid	87.95	61.86
Os08t0532200-01	Rice	plastid	83.13	57.74
KXG22248	Sorghum	plastid	82.23	57.72
Zm00001d038547_P001	Maize	plastid	82.23	57.59
HORVU7Hr1G054380.1	Barley	cytosol, peroxisome, plastid	87.35	56.53
KRH51376	Soybean	plastid	73.19	52.15
GSMUA_Achr6P07940_001	Banana	plastid	74.4	52.11
CDY62883	Canola	plastid	73.8	51.8
KRH60678	Soybean	nucleus	73.19	51.7
CDY41519	Canola	plastid	73.49	51.59
Bra038646.1-P	Field mustard	plastid	73.49	51.59
AT3G48730.1	Thale cress	plastid	72.89	51.27
Bra035836.1-P	Field mustard	plastid	72.89	51.16
PGSC0003DMT400082447	Potato	cytosol	74.1	51.14
AT5G63570.1	Thale cress	plastid	72.89	51.05
CDY16715	Canola	plastid	72.59	50.95
CDX81186	Canola	plastid	72.59	50.95
Solyc04g009200.2.1	Tomato	plastid	73.8	50.83
VIT_17s0000g00900.t01	Wine grape	plastid	71.99	50.53
KRH17479	Soybean	plastid	49.1	39.28
TraesCS1D01G074600.1	Wheat	plastid	21.99	15.87
TraesCS5D01G384500.1	Wheat	mitochondrion	22.29	15.64
TraesCS4D01G170300.1	Wheat	mitochondrion	21.39	15.47
TraesCS1D01G292100.1	Wheat	mitochondrion	20.18	14.05
TraesCS4D01G286900.1	Wheat	mitochondrion	19.88	13.78
TraesCS2D01G418400.2	Wheat	mitochondrion	20.18	13.11
TraesCS7D01G341900.2	Wheat	mitochondrion	18.98	12.4
HORVU7Hr1G054360.1	Barley	plastid	7.53	11.85

Protein Annotations

EnsemblPlants:TraesCS7D01G262000.1	EnsemblPlantsGene:TraesCS7D01G262000	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	InterPro:Aminotrans_3	InterPro:IPR015421
InterPro:IPR015422	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	PANTHER:PTHR43713	PANTHER:PTHR43713:SF2
PFAM:PF00202	ScanProsite:PS00600	SUPFAM:SSF53383	MapMan:7.12.1.4	:	:

Description

No Description!

Coordinates

chr7D:+:239347500..239349679

Molecular Weight (calculated)

35558.8 Da

IEP (calculated)

7.085

GRAVY (calculated)

-0.075

Length

332 amino acids

Sequence
(BLAST)

001: MCVGSNGHLR CAGYRNGSFC KFRNRSLHGS TPPCACIHWE GKILKFEGCY HGHADSFLVE AGSGVATLGL PDSPGVPKGA TVGTLTAPYN DVEAVKKLFE
101: DNKGEIAAVF LEPVVGNAGF IPPQPAFLNA LREVTKQDGA LLVFDEVMTG FRLAYGGAQE YFGITPDVTT LGKIIGGGLP VGAYGGRKDI MEMVAPAGPM
201: YQARTLSGNP LAMTAGIHTL KRLMEPGTYE YLDKVTGELV RRILDAGAKT GHEMCGGHIR GMFGFFFAGG PVHNFDDAKK SDTAKFGRFH RGMLEGVYLA
301: PSQFEAGFTS LAHTTLDIEK TVEAAEEVLR RM

Best Arabidopsis Sequence Match ( AT3G48730.1 )
(BLAST)

001: MAATLTGSGI ALGFSCSAKF SKRASSSSNR RCIKMSVSVE EKTKKFTLQK SEEAFNAAKN LMPGGVNSPV RAFKSVGGQP VVMDSAKGSR IRDIDGNEYI
101: DYVGSWGPAI IGHADDEVLA ALAETMKKGT SFGAPCLLEN VLAEMVISAV PSIEMVRFVN SGTEACMGVL RLARAFTGKQ KFIKFEGCYH GHANSFLVKA
201: GSGVATLGLP DSPGVPKAAT SDTLTAPYND IAAVEKLFEA NKGEIAAIIL EPVVGNSGFI TPKPEFIEGI RRITKDNGAL LIFDEVMTGF RLAYGGAQEY
301: FGITPDLTTL GKIIGGGLPV GAYGGRRDIM EMVAPAGPMY QAGTLSGNPL AMTAGIHTLK RLSQPGTYEY LDKITKELTN GILEAGKKTG HAMCGGYISG
401: MFGFFFTEGP VYDFSDAKKS DTEKFGKFFR GMLEEGVYLA PSQFEAGFTS LAHTSEDIQF TIAAAEKVLS RL

Arabidopsis Description

GSA2Glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42522]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.