Factsheet for HORVU7Hr1G054360.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63570.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G261800.1	Wheat	plastid	85.78	38.35
TraesCS7A01G260800.2	Wheat	plastid	85.31	38.14
TraesCS7B01G158800.1	Wheat	plastid	83.89	37.5
Os08t0532200-01	Rice	plastid	83.89	37.03
Zm00001d038547_P001	Maize	plastid	81.52	36.29
KXG22248	Sorghum	plastid	81.04	36.15
HORVU7Hr1G054380.1	Barley	cytosol, peroxisome, plastid	85.31	35.09
GSMUA_Achr6P07940_001	Banana	plastid	74.41	33.12
KRH51376	Soybean	plastid	68.25	30.9
CDY16715	Canola	plastid	68.72	30.66
VIT_17s0000g00900.t01	Wine grape	plastid	68.25	30.44
Bra035836.1-P	Field mustard	plastid	68.25	30.44
CDX81186	Canola	plastid	68.25	30.44
CDY41519	Canola	plastid	68.25	30.44
CDY62883	Canola	plastid	68.25	30.44
Bra038646.1-P	Field mustard	plastid	67.77	30.23
KRH60678	Soybean	nucleus	67.3	30.21
AT5G63570.1	Thale cress	plastid	67.3	29.96
AT3G48730.1	Thale cress	plastid	66.82	29.87
Solyc04g009200.2.1	Tomato	plastid	67.3	29.46
PGSC0003DMT400082447	Potato	cytosol	66.82	29.31
KRH17479	Soybean	plastid	48.34	24.58
HORVU1Hr1G070220.2	Barley	mitochondrion	20.85	8.91
HORVU4Hr1G075360.5	Barley	mitochondrion	19.43	8.56
HORVU5Hr1G092960.5	Barley	cytosol	18.96	8.46
HORVU1Hr1G015560.5	Barley	plastid	20.38	8.4
TraesCS7D01G262000.1	Wheat	mitochondrion	11.85	7.53
HORVU7Hr1G082330.2	Barley	mitochondrion, plastid	19.91	7.49
HORVU2Hr1G098880.1	Barley	mitochondrion	17.54	7.24

Protein Annotations

EnsemblPlants:HORVU7Hr1G054360.1	EnsemblPlantsGene:HORVU7Hr1G054360	Gene3D:3.90.1150.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	InterPro:Aminotrans_3	InterPro:IPR015422	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	PANTHER:PTHR43713	PANTHER:PTHR43713:SF2	PFAM:PF00202	SEG:seg	SUPFAM:SSF53383
UniParc:UPI000B486ED3	UniProt:A0A287WJU1	MapMan:50.5.4	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:216704870..216706683

Molecular Weight (calculated)

22452.4 Da

IEP (calculated)

9.563

GRAVY (calculated)

0.245

Length

211 amino acids

Sequence
(BLAST)

001: MAGAAAAVAS GISIRPVAAP KISRAPRSRS VVRAAVSIDE KAYTVQKSEE IFNAAKELMP GGVNSPVRAF KSVGGQPIVF DSVKGSHMWD VDGNEYIDYV
101: GSWGPAIIGH ADDKVNAALI ETLKKGTSFG APCALENVLA QMVISAVPSI EMVRFVNSGT EACMGALRLV RAFTGREKIL KFAMIHHSWP VPTLLIAKGF
201: LQACVVHQIH L

Best Arabidopsis Sequence Match ( AT5G63570.1 )
(BLAST)

001: MSATLTGSGT ALGFSCSSKI SKRVSSSPAS NRCCIKMSVS VDEKKKSFSL QKSEEAFNAA KNLMPGGVNS PVRAFKSVGG QPVLIDSVKG SKMWDIDGNE
101: YIDYVGSWGP AIIGHADDEV LAALAETMKK GTSFGAPCLL ENVLAEMVIS AVPSIEMVRF VNSGTEACMG VLRLARAFTN KEKFIKFEGC YHGHANAFLV
201: KAGSGVATLG LPDSPGVPKA ATSDTLTAPY NDLEAVEKLF AAHKGEISAV ILEPVVGNSG FIPPTPEFIN GLRQLTKDNG VLLIFDEVMT GFRLAYGGAQ
301: EYFGITPDLT TLGKIIGGGL PVGAYGGRRD IMEMVAPAGP MYQAGTLSGN PLAMTAGIHT LKRLKQAGTY EYLDKITKEL TNGILEAGKK TGHPMCGGYI
401: SGMFGFFFAE GPVYNFADSK KSDTEKFGRF FRGMLEEGVY FAPSQFEAGF TSLAHTPEDI QLTIAAAERV LSRI

Arabidopsis Description

GSA1Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42799]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.