Factsheet for Os08t0532200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 17189339
nucleus: 19621931
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os10t0114400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63570.1	Os10t0114400-01	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22248	Sorghum	plastid	92.26	93.23
Zm00001d038547_P001	Maize	plastid	91.84	92.62
TraesCS7D01G261800.1	Wheat	plastid	91.21	92.37
TraesCS7A01G260800.2	Wheat	plastid	91.0	92.16
TraesCS7B01G158800.1	Wheat	plastid	90.38	91.53
HORVU7Hr1G054380.1	Barley	cytosol, peroxisome, plastid	90.38	84.21
HORVU7Hr1G054360.1	Barley	plastid	37.03	83.89
TraesCS7D01G262000.1	Wheat	mitochondrion	57.74	83.13
GSMUA_Achr6P07940_001	Banana	plastid	81.38	82.07
KRH51376	Soybean	plastid	75.94	77.9
KRH60678	Soybean	nucleus	75.94	77.23
CDY41519	Canola	plastid	76.15	76.96
CDY62883	Canola	plastid	76.15	76.96
AT3G48730.1	Thale cress	plastid	75.94	76.91
Bra038646.1-P	Field mustard	plastid	75.94	76.74
Bra035836.1-P	Field mustard	plastid	75.94	76.74
CDY16715	Canola	plastid	75.73	76.53
CDX81186	Canola	plastid	75.73	76.53
VIT_17s0000g00900.t01	Wine grape	plastid	75.31	76.11
PGSC0003DMT400082447	Potato	cytosol	76.57	76.09
AT5G63570.1	Thale cress	plastid	75.31	75.95
Solyc04g009200.2.1	Tomato	plastid	76.57	75.93
KRH17479	Soybean	plastid	51.05	58.8
Os05t0129100-00	Rice	plastid	18.62	27.3
Os07t0461900-01	Rice	plastid	17.99	26.22
Os03t0643300-02	Rice	mitochondrion	23.64	23.89
Os05t0475400-02	Rice	peroxisome	18.83	23.02
Os03t0338000-01	Rice	peroxisome	22.59	22.31
Os03t0171900-01	Rice	mitochondrion	20.71	20.37
Os04t0614600-01	Rice	mitochondrion	21.13	19.57
Os02t0112900-00	Rice	cytosol	19.25	19.05
Os04t0614500-01	Rice	plastid	19.67	18.91
Os08t0205900-01	Rice	mitochondrion	20.08	18.82

Protein Annotations

KEGG:00860+5.4.3.8	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EntrezGene:4346136	InterPro:4pyrrol_synth_GluAld_NH2Trfase	MapMan:7.12.1.4
EMBL:AK064826	EMBL:AK104694	InterPro:Aminotrans_3	ProteinID:BAD11647.1	ProteinID:BAF24251.1	ProteinID:BAT06404.1
ProteinID:EAZ43454.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006779	GO:GO:0006782	GO:GO:0008150	GO:GO:0008152
GO:GO:0008483	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0015995
GO:GO:0016740	GO:GO:0016853	GO:GO:0030170	GO:GO:0033014	GO:GO:0042286	InterPro:IPR015421
InterPro:IPR015422	HAMAP:MF_00375	EnsemblPlantsGene:Os08g0532200	EnsemblPlants:Os08t0532200-01	PFAM:PF00202	ScanProsite:PS00600
PANTHER:PTHR43713	PANTHER:PTHR43713:SF2	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	UniProt:Q6YZE2
SUPFAM:SSF53383	TIGRFAMs:TIGR00713	UniParc:UPI0000241687	RefSeq:XP_015650872.1	SEG:seg	:

Description

"Glutamate-1-semialdehyde 2, 1-aminomutase", Glutamate-1-semialdehyde aminotransferaseSimilar to Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA- AT). (Os08t0532200-01);Similar to Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic. (Os08t0532200-02);Similar to Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA- AT). (Os08t0532200-03)

Coordinates

chr8:-:26531415..26534074

Molecular Weight (calculated)

50240.4 Da

IEP (calculated)

6.953

GRAVY (calculated)

0.026

Length

478 amino acids

Sequence
(BLAST)

001: MAGAAAASAA AAAVASGISA RPVAPRPSPS RARAPRSVVR AAISVEKGEK AYTVEKSEEI FNAAKELMPG GVNSPVRAFK SVGGQPIVFD SVKGSRMWDV
101: DGNEYIDYVG SWGPAIIGHA DDTVNAALIE TLKKGTSFGA PCVLENVLAE MVISAVPSIE MVRFVNSGTE ACMGALRLVR AFTGREKILK FEGCYHGHAD
201: SFLVKAGSGV ATLGLPDSPG VPKGATSETL TAPYNDVEAV KKLFEENKGQ IAAVFLEPVV GNAGFIPPQP GFLNALRDLT KQDGALLVFD EVMTGFRLAY
301: GGAQEYFGIT PDVSTLGKII GGGLPVGAYG GRKDIMEMVA PAGPMYQAGT LSGNPLAMTA GIHTLKRLME PGTYDYLDKI TGDLVRGVLD AGAKTGHEMC
401: GGHIRGMFGF FFTAGPVHNF GDAKKSDTAK FGRFYRGMLE EGVYLAPSQF EAGFTSLAHT SQDIEKTVEA AAKVLRRI

Best Arabidopsis Sequence Match ( AT3G48730.1 )
(BLAST)

001: MAATLTGSGI ALGFSCSAKF SKRASSSSNR RCIKMSVSVE EKTKKFTLQK SEEAFNAAKN LMPGGVNSPV RAFKSVGGQP VVMDSAKGSR IRDIDGNEYI
101: DYVGSWGPAI IGHADDEVLA ALAETMKKGT SFGAPCLLEN VLAEMVISAV PSIEMVRFVN SGTEACMGVL RLARAFTGKQ KFIKFEGCYH GHANSFLVKA
201: GSGVATLGLP DSPGVPKAAT SDTLTAPYND IAAVEKLFEA NKGEIAAIIL EPVVGNSGFI TPKPEFIEGI RRITKDNGAL LIFDEVMTGF RLAYGGAQEY
301: FGITPDLTTL GKIIGGGLPV GAYGGRRDIM EMVAPAGPMY QAGTLSGNPL AMTAGIHTLK RLSQPGTYEY LDKITKELTN GILEAGKKTG HAMCGGYISG
401: MFGFFFTEGP VYDFSDAKKS DTEKFGKFFR GMLEEGVYLA PSQFEAGFTS LAHTSEDIQF TIAAAEKVLS RL

Arabidopsis Description

GSA2Glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42522]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.