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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • cytosol 1
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
 mitochondrion: 19010998
mitochondrion: 23027867
msms PMID: 23027867 doi
G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID: 19010998 doi
S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER91172 Sorghum mitochondrion 90.27 91.04
TraesCS5D01G384500.1 Wheat mitochondrion 89.43 89.43
TraesCS5B01G376900.1 Wheat mitochondrion 88.37 89.32
TraesCS5A01G375000.1 Wheat mitochondrion 88.16 88.35
Zm00001d033228_P002 Maize mitochondrion 88.79 86.07
HORVU5Hr1G092960.5 Barley cytosol 83.93 83.93
GSMUA_Achr10P... Banana mitochondrion 79.28 79.11
Solyc08g048450.2.1 Tomato cytosol, plastid 65.12 72.47
VIT_10s0003g03870.t01 Wine grape mitochondrion 69.56 70.6
PGSC0003DMT400076803 Potato cytosol, extracellular, mitochondrion 36.58 69.48
Bra025033.1-P Field mustard mitochondrion 69.77 69.18
AT5G46180.1 Thale cress mitochondrion 68.5 68.21
CDY33459 Canola mitochondrion 60.68 67.21
KRH58670 Soybean mitochondrion 66.38 66.95
CDX77642 Canola mitochondrion 60.25 66.9
KRH42566 Soybean mitochondrion 65.96 66.81
KRH45041 Soybean extracellular, mitochondrion 20.3 64.43
Bra017570.1-P Field mustard mitochondrion 38.05 62.07
KRH04754 Soybean cytosol 17.76 61.76
CDY35151 Canola mitochondrion 47.78 59.32
CDY03236 Canola cytosol 41.01 50.39
Os05t0475400-02 Rice peroxisome 23.26 28.13
Os05t0129100-00 Rice plastid 18.39 26.69
Os07t0461900-01 Rice plastid 18.18 26.22
Os03t0338000-01 Rice peroxisome 25.16 24.59
Os08t0532200-01 Rice plastid 23.89 23.64
Os02t0112900-00 Rice cytosol 24.1 23.6
Os04t0614500-01 Rice plastid 24.31 23.14
Os08t0205900-01 Rice mitochondrion 24.74 22.94
Os04t0614600-01 Rice mitochondrion 24.1 22.09
Os03t0171900-01 Rice mitochondrion 22.41 21.81
Protein Annotations
KEGG:00330+2.6.1.13Gene3D:3.40.640.10Gene3D:3.90.1150.10MapMan:4.1.1.1.4.2.2EntrezGene:4333554ProteinID:AAU90265.1
ProteinID:ABF97848.1EMBL:AK099445InterPro:Aminotrans_3ProteinID:BAF12667.1ProteinID:BAS85449.1ncoils:Coil
GO:GO:0003674GO:GO:0003824GO:GO:0004587GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005759GO:GO:0006561
GO:GO:0006593GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0008270
GO:GO:0008483GO:GO:0009056GO:GO:0009058GO:GO:0009408GO:GO:0009413GO:GO:0009414
GO:GO:0009605GO:GO:0009607GO:GO:0009628GO:GO:0009651GO:GO:0009719GO:GO:0009733
GO:GO:0009737GO:GO:0009741GO:GO:0009753GO:GO:0009816GO:GO:0009987GO:GO:0016740
GO:GO:0019544GO:GO:0030170GO:GO:0042538GO:GO:0042802GO:GO:0051646GO:GO:0055129
InterPro:IPR015421InterPro:IPR015422InterPro:Orn_aminotransInterPro:Orn_aminotrans_mitoEnsemblPlantsGene:Os03g0643300EnsemblPlants:Os03t0643300-02
PFAM:PF00202PIRSF:PIRSF000521ScanProsite:PS00600PANTHER:PTHR11986PANTHER:PTHR11986:SF18InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorUniProt:Q10G56SUPFAM:SSF53383TIGRFAMs:TIGR01885UniParc:UPI0000DB46F6
RefSeq:XP_015630389.1SEG:seg::::
Description
ornithine delta-aminotransferase, ornithine aminotransferaseOrnithine delta-aminotransferase, Abiotic stress tolerance (Os03t0643300-02)
Coordinates
chr3:-:24810090..24818037
Molecular Weight (calculated)
51445.3 Da
IEP (calculated)
7.658
GRAVY (calculated)
-0.158
Length
473 amino acids
Sequence
(BLAST)
001: MAAALARRGG GGLARALARG RGMCSATAAE RAAGAALTSE ELMRMERERS AHNYHPIPVV FSKGEGSHIL DPEGNKYIDF LSAYSAVNQG HCHPKVLRAL
101: KEQAERLTLS SRAFYNDKFP IFAEYLTSMF GYEMMLPMNT GAEGVETAIK LVRKWGYEKK KIPKNEALIV SCCGCFHGRT LGVISMSCDN DATRGFGPLV
201: PGHLKVDFGD TDGLEKIFKD HGERICGFLF EPIQGEAGVI IPPDGYLKAV RDLCSRHNIL MIADEIQTGI ARTGKMLACD WENIRPDVVI LGKALGAGVV
301: PVSAVLADKD IMLCIKPGEH GSTFGGNPLA SAVAVASLKV VTDEGLVERA AKLGQEFRDQ LQKVQQRFPQ IIREVRGRGL LNAVDLSNEA LSPASAYDIC
401: IKLKERGVLA KPTHDTIIRL APPLSISPEE LAEASKAFSD VLEHDLPQLQ KQIKKTESAA EKQSCDRCGR DLY
Best Arabidopsis Sequence Match ( AT5G46180.1 )
(BLAST)
001: MAATTRRLLY YVSKRFSTAG VRRSYGGLPQ SNSKSPPSSS QRLMELESEF SAHNYHPVPV VFSRANGSTI WDPEGKRYID FLAAYSAVNQ GHCHPKIMKA
101: LQEQVEKLTL SSRAFYNDKF PVFAERLTNM FGYDMVLPMN TGAEGVETAL KLARKWGHEK KNIPKDEAII VSCCGCFHGR TLAIVSMSCD NDATRGFGPL
201: LPGNLKVDFG DADSLEKIFK EKGDRIAGFL FEPIQGEAGV IIPPDGYLKA VRELCTKYNV LMIADEVQSG LARSGKMLAC DWEEIRPDMV ILGKALGGGV
301: IPVSAVLADK DVMLHIKPGQ HGSTFGGNPL ASAVAMASLD VIVEEKLVER SASLGEELRI QLNEIKKQFP KYIKEVRGRG LFNAIEFNSE SLSPVSAYDI
401: CLSLKERGVL AKPTHNTIVR LTPPLSISSD ELRDGSEALH DVLELDLPNL LKINSGKTPV SHITECDRCG RNLYA
Arabidopsis Description
DELTA-OATOrnithine aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK4]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.