CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77642	Canola	mitochondrion	96.72	96.95
Bra025033.1-P	Field mustard	mitochondrion	97.66	87.42
AT5G46180.1	Thale cress	mitochondrion	91.33	82.11
CDY35151	Canola	mitochondrion	63.47	71.13
KRH45041	Soybean	extracellular, mitochondrion	24.59	70.47
KRH04754	Soybean	cytosol	22.01	69.12
PGSC0003DMT400076803	Potato	cytosol, extracellular, mitochondrion	39.81	68.27
VIT_10s0003g03870.t01	Wine grape	mitochondrion	70.96	65.02
CDY03236	Canola	cytosol	58.31	64.68
Solyc08g048450.2.1	Tomato	cytosol, plastid	63.7	64.0
KRH58670	Soybean	mitochondrion	67.45	61.41
EER91172	Sorghum	mitochondrion	66.98	60.98
KRH42566	Soybean	mitochondrion	66.51	60.81
Os03t0643300-02	Rice	mitochondrion	67.21	60.68
TraesCS5B01G376900.1	Wheat	mitochondrion	66.28	60.47
TraesCS5D01G384500.1	Wheat	mitochondrion	66.98	60.47
TraesCS5A01G375000.1	Wheat	mitochondrion	66.51	60.17
GSMUA_Achr10P...	Banana	mitochondrion	65.81	59.28
Zm00001d033228_P002	Maize	mitochondrion	66.74	58.4
HORVU5Hr1G092960.5	Barley	cytosol	64.17	57.93
CDY61533	Canola	peroxisome	14.52	33.16
CDY18386	Canola	mitochondrion	15.46	28.33
CDY67620	Canola	mitochondrion, plastid	28.1	26.79
CDY37615	Canola	mitochondrion	28.1	26.79
CDX87325	Canola	mitochondrion	27.63	26.16
CDY39963	Canola	mitochondrion	27.4	25.94
CDY14465	Canola	cytosol	24.12	24.24
CDY54458	Canola	mitochondrion	26.7	24.05
CDY66720	Canola	mitochondrion	26.93	23.37
CDX90347	Canola	mitochondrion	25.76	23.11
CDY63451	Canola	mitochondrion	25.76	23.11
CDY41995	Canola	mitochondrion	25.53	22.9
CDY42643	Canola	mitochondrion	25.53	22.9
CDY54421	Canola	mitochondrion	25.53	22.66
CDY00650	Canola	mitochondrion	23.42	21.28
CDX73944	Canola	mitochondrion	23.42	21.28
CDY00651	Canola	mitochondrion	23.42	21.28
CDY10621	Canola	extracellular, plastid	11.71	21.19
CDY58748	Canola	mitochondrion	24.59	21.08
CDY10622	Canola	golgi	23.18	20.97
CDY37389	Canola	mitochondrion	24.36	20.8
CDY10619	Canola	mitochondrion	24.36	20.8
CDY39506	Canola	mitochondrion	24.36	20.55
CDY41519	Canola	plastid	22.01	19.87
CDY62883	Canola	plastid	21.78	19.66
CDY16715	Canola	plastid	21.55	19.45
CDX81186	Canola	plastid	21.31	19.24
CDY68670	Canola	cytosol	19.2	18.39
CDY61531	Canola	mitochondrion	7.03	14.29
CDY71561	Canola	mitochondrion	5.39	10.36

Protein Annotations

KEGG:00330+2.6.1.13	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.1.1.4.2.2	GO:A0A078H7I9	UniProt:A0A078H7I9
InterPro:Aminotrans_3	EnsemblPlants:CDY33459	ProteinID:CDY33459	ProteinID:CDY33459.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004587	GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00054698001
InterPro:IPR015421	InterPro:IPR015422	InterPro:Orn_aminotrans_mito	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600
PANTHER:PTHR11986	PANTHER:PTHR11986:SF18	MetaCyc:PWY-3341	MetaCyc:PWY-4981	MetaCyc:PWY-6344	MetaCyc:PWY-6922
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniPathway:UPA00098	UniParc:UPI0004EED062
SEG:seg	:	:	:	:	:

Description

BnaA06g36140DBnaA06g36140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7I9]

Coordinates

chrLK032315:-:24342..26898

Molecular Weight (calculated)

46658.1 Da

IEP (calculated)

7.277

GRAVY (calculated)

-0.246

Length

427 amino acids

Sequence
(BLAST)

001: MAAATRRLIQ RVSTTRLSTA GARRSYGGLP ESNSKAPSSS SSQRLMELES KFSAHNYHPV PVVFSRGNGS TIWDPEGKKY IDFLAAYSAV NQGHCHPKII
101: KALQEQVEKL TLSSRAFYND KFPVFAERLT NMFGYEMKMG CDNDATRGFG PLLPGNLKVD FGDADSLEKI FKEKGDKIAG FLFEPIQGEA GVVIPPEGYL
201: KAVRDLCTKH NVLMIADEVQ SGLARSGKML ACDWEEIRPD MVILGKALGG GVIPVSAVLA DKDVMLHIKP GQHGSTFGGN PLASAVAMAS LDVIEEEKLV
301: ERSASLGEEL RIQLNEIKKQ FPDHIKEVRG RGLFNAVEFD SESLSPVSAY DICLSLKERG VLAKPTHNTI VRLTPPLSIS SDELREGSKA LRDVLEVDLP
401: NLQKINAGKT PVSHLTECDR CGRSLYA

Best Arabidopsis Sequence Match ( AT5G46180.1 )
(BLAST)

001: MAATTRRLLY YVSKRFSTAG VRRSYGGLPQ SNSKSPPSSS QRLMELESEF SAHNYHPVPV VFSRANGSTI WDPEGKRYID FLAAYSAVNQ GHCHPKIMKA
101: LQEQVEKLTL SSRAFYNDKF PVFAERLTNM FGYDMVLPMN TGAEGVETAL KLARKWGHEK KNIPKDEAII VSCCGCFHGR TLAIVSMSCD NDATRGFGPL
201: LPGNLKVDFG DADSLEKIFK EKGDRIAGFL FEPIQGEAGV IIPPDGYLKA VRELCTKYNV LMIADEVQSG LARSGKMLAC DWEEIRPDMV ILGKALGGGV
301: IPVSAVLADK DVMLHIKPGQ HGSTFGGNPL ASAVAMASLD VIVEEKLVER SASLGEELRI QLNEIKKQFP KYIKEVRGRG LFNAIEFNSE SLSPVSAYDI
401: CLSLKERGVL AKPTHNTIVR LTPPLSISSD ELRDGSEALH DVLELDLPNL LKINSGKTPV SHITECDRCG RNLYA

Arabidopsis Description

DELTA-OATOrnithine aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.