CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41995	Canola	mitochondrion	97.9	97.9
CDX90347	Canola	mitochondrion	96.01	96.01
CDY63451	Canola	mitochondrion	95.17	95.17
AT4G39660.1	Thale cress	mitochondrion	90.76	90.76
GSMUA_Achr10P...	Banana	peroxisome	74.37	83.89
VIT_07s0031g01330.t01	Wine grape	mitochondrion	80.04	80.72
KRH43286	Soybean	mitochondrion	80.46	80.63
PGSC0003DMT400033328	Potato	extracellular	80.04	80.55
KRH59427	Soybean	mitochondrion	80.25	80.08
Solyc04g054310.2.1	Tomato	extracellular, plastid	78.99	79.49
KRH31231	Soybean	mitochondrion	78.78	79.28
Zm00001d027861_P001	Maize	mitochondrion	75.21	74.9
KXG40078	Sorghum	mitochondrion	74.58	74.11
HORVU4Hr1G075360.5	Barley	mitochondrion	74.58	74.11
TraesCS4A01G015900.1	Wheat	mitochondrion	74.37	73.9
TraesCS4D01G286900.1	Wheat	mitochondrion	74.37	73.9
TraesCS4B01G288100.1	Wheat	mitochondrion	74.16	73.7
Os03t0171900-01	Rice	mitochondrion	74.58	73.05
KRG97644	Soybean	mitochondrion	59.45	72.75
CDY61533	Canola	peroxisome	27.1	68.98
CDY14465	Canola	cytosol	54.41	60.94
CDY54421	Canola	mitochondrion	61.34	60.71
CDY18386	Canola	mitochondrion	29.62	60.52
CDY00650	Canola	mitochondrion	59.24	60.0
CDY00651	Canola	mitochondrion	59.03	59.79
CDY54458	Canola	mitochondrion	59.45	59.7
CDX73944	Canola	mitochondrion	58.82	59.57
CDY66720	Canola	mitochondrion	59.66	57.72
CDY61531	Canola	mitochondrion	24.16	54.76
CDY71561	Canola	mitochondrion	23.95	51.35
CDY67620	Canola	mitochondrion, plastid	25.42	27.01
CDY37615	Canola	mitochondrion	25.21	26.79
CDX87325	Canola	mitochondrion	25.21	26.61
CDY39963	Canola	mitochondrion	25.21	26.61
CDY33459	Canola	mitochondrion	22.9	25.53
CDX77642	Canola	mitochondrion	22.27	24.88
CDY35151	Canola	mitochondrion	19.12	23.88
CDY39506	Canola	mitochondrion	24.37	22.92
CDY58748	Canola	mitochondrion	23.95	22.89
CDY37389	Canola	mitochondrion	23.95	22.8
CDY10619	Canola	mitochondrion	23.74	22.6
CDY10622	Canola	golgi	21.43	21.61
CDY68670	Canola	cytosol	19.33	20.63
CDY16715	Canola	plastid	20.17	20.3
CDX81186	Canola	plastid	20.17	20.3
CDY41519	Canola	plastid	20.17	20.3
CDY62883	Canola	plastid	20.17	20.3
CDY03236	Canola	cytosol	15.55	19.22
CDY10621	Canola	extracellular, plastid	8.61	17.37

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	GO:A0A078I0N9	UniProt:A0A078I0N9	InterPro:Aminotrans_3
EnsemblPlants:CDY42643	ProteinID:CDY42643	ProteinID:CDY42643.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00075150001	InterPro:IPR015421
InterPro:IPR015422	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0004EE05A3	SEG:seg

Description

BnaC01g00550DBnaC01g00550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0N9]

Coordinates

chrLK032530:+:199099..201796

Molecular Weight (calculated)

51940.4 Da

IEP (calculated)

8.166

GRAVY (calculated)

-0.137

Length

476 amino acids

Sequence
(BLAST)

001: MSRLLKRVVH RASSTSSLIH HRPAISFLRS DFSTSSSPPQ IPPFGYEPRP YNGPSADEVF EKRKKFLGPS LFHFYQKPLN IVEGKMQYLF DETGRRYLDA
101: FAGIVTVSCG HCHPDILNAI NEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSMYAKDVQ DHIDYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYDIV HKAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LATKIQFNTF GGNPVCSAGG HAVLKVIDKE RRQTHCAEVG SHLIQRLKDL QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETAVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Best Arabidopsis Sequence Match ( AT4G39660.1 )
(BLAST)

001: MALQRQLLKR ATSDIYHRRA ISLLRTDFST SPSIADAPPH IPPFVHQPRP YKGPSADEVL QKRKKFLGPS LFHYYQKPLN IVEGKMQYLY DESGRRYLDA
101: FAGIVTVSCG HCHPDILNAI TEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSLYAKDVH DHIEYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYEIV RNAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LASKILFNTF GGNPVCSAGG LAVLNVIDKE KRQEHCAEVG SHLIQRLKDV QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETSVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Arabidopsis Description

AGT2Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940M2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.