CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
peroxisome 2

Predictors

GFP

MS/MS

Papers

mitochondrion: 27780359

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43286	Soybean	mitochondrion	95.81	96.21
GSMUA_Achr10P...	Banana	peroxisome	72.75	82.23
CDX90347	Canola	mitochondrion	80.92	81.09
KRH31231	Soybean	mitochondrion	79.87	80.55
VIT_07s0031g01330.t01	Wine grape	mitochondrion	79.66	80.51
CDY63451	Canola	mitochondrion	80.29	80.46
CDY42643	Canola	mitochondrion	80.08	80.25
AT4G39660.1	Thale cress	mitochondrion	79.45	79.62
PGSC0003DMT400033328	Potato	extracellular	78.83	79.49
CDY41995	Canola	mitochondrion	79.25	79.41
Bra011843.1-P	Field mustard	mitochondrion	79.25	79.41
Solyc04g054310.2.1	Tomato	extracellular, plastid	77.57	78.22
Zm00001d027861_P001	Maize	mitochondrion	75.05	74.9
KXG40078	Sorghum	mitochondrion	74.84	74.53
HORVU4Hr1G075360.5	Barley	mitochondrion	74.42	74.11
TraesCS4D01G286900.1	Wheat	mitochondrion	74.21	73.9
TraesCS4A01G015900.1	Wheat	mitochondrion	74.21	73.9
TraesCS4B01G288100.1	Wheat	mitochondrion	73.79	73.49
KRG97644	Soybean	mitochondrion	59.33	72.75
Os03t0171900-01	Rice	mitochondrion	72.75	71.4
KRH76075	Soybean	mitochondrion	59.54	59.79
KRH65497	Soybean	mitochondrion	59.12	59.37
KRH00394	Soybean	mitochondrion	59.75	59.13
Bra010671.1-P	Field mustard	mitochondrion	78.83	42.73
KRH45041	Soybean	extracellular, mitochondrion	9.01	28.86
KRH04754	Soybean	cytosol	7.76	27.21
KRH58670	Soybean	mitochondrion	26.62	27.08
KRH48868	Soybean	nucleus	26.42	26.98
KRH35638	Soybean	cytosol	26.0	26.78
KRH42566	Soybean	mitochondrion	25.79	26.34
KRH24110	Soybean	mitochondrion	24.32	22.61
KRH51376	Soybean	plastid	21.59	22.1
KRH60678	Soybean	nucleus	21.59	21.91
KRH29085	Soybean	cytosol	23.48	21.13
KRH17479	Soybean	plastid	15.51	17.83

Protein Annotations

EntrezGene:100804017	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	UniProt:A0A0R4J3C5	EMBL:ACUP02003323
InterPro:Aminotrans_3	EnsemblPlantsGene:GLYMA_05G182600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483
GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	EnsemblPlants:KRH59427	ProteinID:KRH59427
ProteinID:KRH59427.1	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI00018C6B7A	SEG:seg

Description

hypothetical protein

Coordinates

chr5:-:37038089..37042117

Molecular Weight (calculated)

51420.0 Da

IEP (calculated)

7.694

GRAVY (calculated)

-0.029

Length

477 amino acids

Sequence
(BLAST)

001: MAAMQRPLKR TIAIAKQRAC FSSLLPSAAA AAAADTVAPP QLPPFDHQPH PYNGPSADEV FAKRKTFLGP SVFHYYKKPL NIVEGKMQYL YDDSGRRYLD
101: AFAGIVTVSC GHCHPEILNA ITEQSKLLQH ATTIYLHHTI GDFAEALAAK MPGNLKVVYF VNSGSEANEL AMMMARLYTG NLGMISLRNA YHGGSSSTLG
201: LTALNSWKYP IPEGHVHHVM NPDPYHGAFG TDAASYANDV QDHIDYGTSG KVAGFIAESI QGVGGAVELA PGYLKLVYDI IHKAGGVCIA DEVQTGFGRT
301: GSHYWGFETQ GVIPDIVTMA KGIGNGLPLG AVVTTPEIAS VMAQKIQFNT FGGNPVCSAG GLAVLRVLDK EKRQAHCADV GSYLLERLRF LMERHDIIGN
401: VRGRGLMVGL ELVTDRTNKT PAKAETAVVF EKLRELGVLV GKGGLHGNVF RIKPPMCFSK DDADFLVDAL DYSLSKL

Best Arabidopsis Sequence Match ( AT4G39660.1 )
(BLAST)

001: MALQRQLLKR ATSDIYHRRA ISLLRTDFST SPSIADAPPH IPPFVHQPRP YKGPSADEVL QKRKKFLGPS LFHYYQKPLN IVEGKMQYLY DESGRRYLDA
101: FAGIVTVSCG HCHPDILNAI TEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSLYAKDVH DHIEYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYEIV RNAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LASKILFNTF GGNPVCSAGG LAVLNVIDKE KRQEHCAEVG SHLIQRLKDV QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETSVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Arabidopsis Description

AGT2Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940M2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.