Factsheet for Bra011843.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
plastid 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41995	Canola	mitochondrion	100.0	100.0
AT4G39660.1	Thale cress	mitochondrion	90.76	90.76
GSMUA_Achr10P...	Banana	peroxisome	74.16	83.65
VIT_07s0031g01330.t01	Wine grape	mitochondrion	80.25	80.93
PGSC0003DMT400033328	Potato	extracellular	80.25	80.76
KRH43286	Soybean	mitochondrion	79.62	79.79
Solyc04g054310.2.1	Tomato	extracellular, plastid	79.2	79.7
KRH59427	Soybean	mitochondrion	79.41	79.25
KRH31231	Soybean	mitochondrion	78.15	78.65
Zm00001d027861_P001	Maize	mitochondrion	75.21	74.9
KXG40078	Sorghum	mitochondrion	74.58	74.11
HORVU4Hr1G075360.5	Barley	mitochondrion	74.58	74.11
TraesCS4A01G015900.1	Wheat	mitochondrion	74.37	73.9
TraesCS4D01G286900.1	Wheat	mitochondrion	74.37	73.9
TraesCS4B01G288100.1	Wheat	mitochondrion	73.95	73.49
Os03t0171900-01	Rice	mitochondrion	74.16	72.63
KRG97644	Soybean	mitochondrion	58.61	71.72
Bra017119.1-P	Field mustard	mitochondrion	60.5	60.13
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	57.35	59.61
Bra005111.1-P	Field mustard	mitochondrion	58.61	58.86
Bra000060.1-P	Field mustard	mitochondrion	58.61	58.61
Bra010671.1-P	Field mustard	mitochondrion	92.86	50.23
Bra008453.1-P	Field mustard	plastid	25.42	27.01
Bra035168.1-P	Field mustard	mitochondrion	25.21	26.61
Bra025033.1-P	Field mustard	mitochondrion	25.0	24.95
Bra017570.1-P	Field mustard	mitochondrion	14.92	24.48
Bra023845.1-P	Field mustard	mitochondrion	24.16	22.95
Bra031332.1-P	Field mustard	mitochondrion	23.74	22.6
Bra031335.1-P	Field mustard	mitochondrion	22.48	21.31
Bra038646.1-P	Field mustard	plastid	20.59	20.72
Bra035836.1-P	Field mustard	plastid	20.59	20.72
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	19.12	18.61
Bra031334.1-P	Field mustard	cytosol	7.98	18.01

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	InterPro:Aminotrans_3	EnsemblPlantsGene:Bra011843	EnsemblPlants:Bra011843.1
EnsemblPlants:Bra011843.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483	GO:GO:0016740
GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4D5T6	PFAM:PF00202	PIRSF:PIRSF000521
ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI0001B641BF	SEG:seg	:	:	:

Description

AT4G39660 (E=2e-248) AGT2 | AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2); alanine-glyoxylate transaminase/ catalytic/ pyridoxal phosphate binding / transaminase

Coordinates

chrA01:+:264464..266659

Molecular Weight (calculated)

52231.9 Da

IEP (calculated)

8.536

GRAVY (calculated)

-0.158

Length

476 amino acids

Sequence
(BLAST)

001: MRQLLKRVFF HRASSLIHHR HRPAVSFLRS DFSTSSSPPQ IPPFGYEPRP YNGPSAEEVF EKRKKFLGPS LFHFYQKPLN IVEGKMQYLF DETGRRYLDA
101: FAGIVTVSCG HCHPDILNAI NEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSMYAKDVQ DHIDYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYDIV RKAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LATKIQFNTF GGNPVCSAGG HAVLKVIDKE RRQTHCAEVG SHLIQRLKDL QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETAVLFE QLREMGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Best Arabidopsis Sequence Match ( AT4G39660.1 )
(BLAST)

001: MALQRQLLKR ATSDIYHRRA ISLLRTDFST SPSIADAPPH IPPFVHQPRP YKGPSADEVL QKRKKFLGPS LFHYYQKPLN IVEGKMQYLY DESGRRYLDA
101: FAGIVTVSCG HCHPDILNAI TEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSLYAKDVH DHIEYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYEIV RNAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LASKILFNTF GGNPVCSAGG LAVLNVIDKE KRQEHCAEVG SHLIQRLKDV QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETSVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Arabidopsis Description

AGT2Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940M2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.