Factsheet for Bra023845.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
nucleus 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39506	Canola	mitochondrion	100.0	99.01
Bra031332.1-P	Field mustard	mitochondrion	94.21	94.4
Bra031335.1-P	Field mustard	mitochondrion	82.63	82.47
KRH24110	Soybean	mitochondrion	79.04	77.19
EES14702	Sorghum	mitochondrion	77.05	75.83
HORVU2Hr1G098880.1	Barley	mitochondrion	77.05	75.54
PGSC0003DMT400030683	Potato	mitochondrion	77.64	75.53
Os04t0614600-01	Rice	mitochondrion	77.64	75.39
Solyc07g043310.2.1	Tomato	nucleus	77.45	75.34
PGSC0003DMT400062372	Potato	plastid	77.45	75.19
Solyc12g006450.1.1	Tomato	plastid	77.45	75.19
TraesCS2B01G440400.1	Wheat	golgi	76.65	75.15
TraesCS2A01G421400.1	Wheat	mitochondrion	76.45	74.95
GSMUA_Achr5P00340_001	Banana	mitochondrion	75.45	74.85
Zm00001d037507_P015	Maize	cytosol, nucleus, peroxisome	22.95	74.68
KRH29085	Soybean	cytosol	78.84	74.53
EES11419	Sorghum	mitochondrion	75.85	74.36
TraesCS2D01G418400.2	Wheat	mitochondrion	75.85	74.36
Os08t0205900-01	Rice	mitochondrion	75.65	74.31
PGSC0003DMT400064961	Potato	cytosol	67.86	74.24
Solyc08g014610.2.1	Tomato	cytosol	67.66	74.02
Solyc12g006470.1.1	Tomato	extracellular, nucleus	67.66	74.02
Zm00001d049380_P011	Maize	endoplasmic reticulum, mitochondrion	75.85	73.93
TraesCS7D01G341900.2	Wheat	mitochondrion	74.65	73.62
TraesCS7B01G246800.1	Wheat	mitochondrion	74.45	73.43
Zm00001d026293_P001	Maize	mitochondrion	75.05	73.15
Zm00001d015445_P008	Maize	cytosol	20.76	72.73
PGSC0003DMT400062385	Potato	cytosol, peroxisome, plastid	44.31	72.55
Zm00001d002326_P003	Maize	mitochondrion	74.85	72.39
VIT_03s0017g01720.t01	Wine grape	cytosol, peroxisome, plastid	71.06	72.21
Zm00001d019161_P001	Maize	cytosol, mitochondrion, nucleus	15.37	71.96
Os02t0112900-00	Rice	cytosol	69.26	71.84
TraesCS7A01G334200.1	Wheat	mitochondrion	73.45	71.32
Os04t0614500-01	Rice	plastid	70.46	71.03
TraesCS7B01G253600.1	Wheat	cytosol, nucleus, peroxisome	68.46	70.87
Bra031334.1-P	Field mustard	cytosol	28.34	67.3
TraesCS7A01G373400.1	Wheat	plastid	63.07	67.23
HORVU7Hr1G082330.2	Barley	mitochondrion, plastid	74.25	66.31
Zm00001d015444_P003	Maize	mitochondrion	27.54	65.09
Bra008453.1-P	Field mustard	plastid	23.75	26.56
Bra035168.1-P	Field mustard	mitochondrion	23.35	25.94
Bra025033.1-P	Field mustard	mitochondrion	23.55	24.74
Bra011843.1-P	Field mustard	mitochondrion	22.95	24.16
Bra005111.1-P	Field mustard	mitochondrion	22.16	23.42
Bra000060.1-P	Field mustard	mitochondrion	22.16	23.32
Bra017570.1-P	Field mustard	mitochondrion	13.37	23.1
Bra017119.1-P	Field mustard	mitochondrion	21.76	22.76
Bra001341.1-P	Field mustard	mitochondrion, peroxisome	20.56	22.49
Bra038646.1-P	Field mustard	plastid	19.36	20.51
Bra035836.1-P	Field mustard	plastid	18.76	19.87
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	17.56	18.0
Bra010671.1-P	Field mustard	mitochondrion	22.16	12.61

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.2.2.1	InterPro:Aminotrans_3	EnsemblPlantsGene:Bra023845	EnsemblPlants:Bra023845.1
EnsemblPlants:Bra023845.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483
GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4E4Z1	PFAM:PF00202
PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR42684	PANTHER:PTHR42684:SF5	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0002544361	SEG:seg	:	:

Description

AT3G22200 (E=1e-259) POP2, GABA-T, HER1 | POP2 (POLLEN-PISTIL INCOMPATIBILITY 2); 4-aminobutyrate transaminase/ 4-aminobutyrate:pyruvate transaminase

Coordinates

chrA01:-:20377577..20381195

Molecular Weight (calculated)

55090.3 Da

IEP (calculated)

8.326

GRAVY (calculated)

-0.157

Length

501 amino acids

Sequence
(BLAST)

001: MTMINSLRRM ARSSQVTLQS RYAASSSSGS RIFTTEASPQ KQTIVGSKGH DMLAPFTAGW QSADLHPLII AKSEGSYVYD DHGKKYLDSL AGLWCTALGG
101: NEARLVSAAV EQLKTLPFYH SFWNRTTKPS LDLAKDLLAM FTANKMAKAF FTNSGSEAND TQVKLVWYYN NALGRPEKKK FIARKKSYHG STLISASLSG
201: LPALHQNFDL PAPFVLHTDC PHYWRFHLPG ETEEEFSTRL AKNLEDLIIK EGPETIGAFI AEPVMGAGGV IPPPATYFEK IQAVVKKYDI LFIADEVICA
301: FGRLGTMFGC DKYNIKPDLV SLAKALSSAY MPIGAILMSQ EVADVIYSQS NKLGAFSHGF TYSGHPVSCA VAIEALKIYK ERNTPEHVAK VAPRFQDGLK
401: AFAKTSPIIG EIRGTGLILG TEFTDNKSPN ELFPPEWGVG AYFGAECQKR GMLVRVAGDS IMMSPPLIIS PEEIDELITI YGEALKATEE RVKELKTQQK
501: K

Best Arabidopsis Sequence Match ( AT3G22200.1 )
(BLAST)

001: MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA
101: LGGNEPRLVS AAVEQLNTLP FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE KKKFIARKKS YHGSTLISAS
201: LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV
301: ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD
401: GVKAFASGSP IIGETRGTGL ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL ISIYGKALKA TEEKVKELKA
501: QHKK

Arabidopsis Description

POP2Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:TAIR;Acc:AT3G22200]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.