Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037507_P015 | Maize | cytosol, nucleus, peroxisome | 98.6 | 91.56 |
| Zm00001d015444_P003 | Maize | mitochondrion | 98.6 | 66.51 |
| PGSC0003DMT400062385 | Potato | cytosol, peroxisome, plastid | 62.24 | 29.09 |
| EES14702 | Sorghum | mitochondrion | 93.71 | 26.33 |
| Zm00001d049380_P011 | Maize | endoplasmic reticulum, mitochondrion | 94.41 | 26.26 |
| Os08t0205900-01 | Rice | mitochondrion | 88.81 | 24.9 |
| TraesCS7D01G341900.2 | Wheat | mitochondrion | 87.41 | 24.61 |
| TraesCS7B01G246800.1 | Wheat | mitochondrion | 86.71 | 24.41 |
| Bra031334.1-P | Field mustard | cytosol | 33.57 | 22.75 |
| HORVU7Hr1G082330.2 | Barley | mitochondrion, plastid | 86.71 | 22.1 |
| TraesCS7A01G334200.1 | Wheat | mitochondrion | 79.72 | 22.09 |
| GSMUA_Achr5P00340_001 | Banana | mitochondrion | 76.22 | 21.58 |
| CDY10619 | Canola | mitochondrion | 73.43 | 21.0 |
| CDY37389 | Canola | mitochondrion | 73.43 | 21.0 |
| Bra031332.1-P | Field mustard | mitochondrion | 73.43 | 21.0 |
| CDY58748 | Canola | mitochondrion | 72.73 | 20.88 |
| Bra023845.1-P | Field mustard | mitochondrion | 72.73 | 20.76 |
| CDY39506 | Canola | mitochondrion | 72.73 | 20.55 |
| Zm00001d026293_P001 | Maize | mitochondrion | 73.43 | 20.43 |
| CDY10621 | Canola | extracellular, plastid | 33.57 | 20.34 |
| Zm00001d002326_P003 | Maize | mitochondrion | 73.43 | 20.27 |
| KRH24110 | Soybean | mitochondrion | 72.03 | 20.08 |
| CDY10622 | Canola | golgi | 65.73 | 19.92 |
| VIT_03s0017g01720.t01 | Wine grape | cytosol, peroxisome, plastid | 68.53 | 19.88 |
| Solyc12g006470.1.1 | Tomato | extracellular, nucleus | 63.64 | 19.87 |
| VIT_03s0017g01760.t01 | Wine grape | mitochondrion | 72.73 | 19.73 |
| PGSC0003DMT400030683 | Potato | mitochondrion | 70.63 | 19.61 |
| AT3G22200.2 | Thale cress | mitochondrion | 69.93 | 19.49 |
| KRH29085 | Soybean | cytosol | 72.03 | 19.43 |
| Solyc07g043310.2.1 | Tomato | nucleus | 69.93 | 19.42 |
| Solyc12g006450.1.1 | Tomato | plastid | 69.93 | 19.38 |
| PGSC0003DMT400062372 | Potato | plastid | 69.93 | 19.38 |
| PGSC0003DMT400064961 | Potato | cytosol | 60.14 | 18.78 |
| Solyc08g014610.2.1 | Tomato | cytosol | 59.44 | 18.56 |
| Bra031335.1-P | Field mustard | mitochondrion | 65.03 | 18.53 |
| Zm00001d038460_P007 | Maize | plasma membrane | 24.48 | 7.46 |
| Zm00001d033228_P002 | Maize | mitochondrion | 24.48 | 7.17 |
| Zm00001d038453_P003 | Maize | mitochondrion | 24.48 | 6.88 |
| Zm00001d035443_P001 | Maize | plastid | 23.78 | 6.87 |
| Zm00001d027861_P001 | Maize | mitochondrion | 20.98 | 6.28 |
| Zm00001d029083_P001 | Maize | extracellular | 17.48 | 5.53 |
| Zm00001d038547_P001 | Maize | plastid | 13.29 | 4.01 |
| Zm00001d043951_P001 | Maize | cytosol | 4.9 | 3.2 |
| Zm00001d019161_P001 | Maize | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | MapMan:35.1 | UniProt:A0A1D6H212 | ProteinID:AQK68928.1 | InterPro:Aminotrans_3 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008483 | GO:GO:0016740 | GO:GO:0030170 |
| InterPro:IPR015421 | InterPro:IPR015422 | PFAM:PF00202 | PANTHER:PTHR42684 | PANTHER:PTHR42684:SF2 | InterPro:PyrdxlP-dep_Trfase |
| InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI000844E4B5 | EnsemblPlantsGene:Zm00001d015445 | EnsemblPlants:Zm00001d015445_P008 |
| EnsemblPlants:Zm00001d015445_T008 | : | : | : | : | : |
Description
Gamma-aminobutyrate transaminase POP2 mitochondrial
Coordinates
chr5:+:90494921..90498102
Molecular Weight (calculated)
15580.0 Da
IEP (calculated)
4.740
GRAVY (calculated)
-0.066
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGCDMYNIK PDLVSIAKAL SSAYMPIGAI LVSPEITDVN YSQSNKLGKS NPIMIRGLGL ILGTEFVDNK SPNDPFPAEW GVGSIFGTEC EKRGMLIRVA
101: GDNIMLSPPL IMTPNEVEEI ISKFGDALKA TEERIGELKS RKN
101: GDNIMLSPPL IMTPNEVEEI ISKFGDALKA TEERIGELKS RKN
001: MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA
101: LGGNEPRLVS AAVEQLNTLP FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE KKKFIARKKS YHGSTLISAS
201: LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV
301: ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD
401: GVKAFASGSP IIGETRGTGL ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL ISIYGKALKA TEEKVKELKA
501: QHKK
101: LGGNEPRLVS AAVEQLNTLP FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE KKKFIARKKS YHGSTLISAS
201: LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV
301: ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD
401: GVKAFASGSP IIGETRGTGL ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL ISIYGKALKA TEEKVKELKA
501: QHKK
Arabidopsis Description
POP2Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:TAIR;Acc:AT3G22200]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.