Factsheet for Zm00001d037507_P015

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

mitochondrion 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015445_P008	Maize	cytosol	91.56	98.6
Zm00001d015444_P003	Maize	mitochondrion	98.05	71.23
PGSC0003DMT400062385	Potato	cytosol, peroxisome, plastid	63.64	32.03
EES14702	Sorghum	mitochondrion	94.81	28.68
Zm00001d049380_P011	Maize	endoplasmic reticulum, mitochondrion	95.45	28.6
Os08t0205900-01	Rice	mitochondrion	88.96	26.86
TraesCS7D01G341900.2	Wheat	mitochondrion	87.01	26.38
TraesCS7B01G246800.1	Wheat	mitochondrion	86.36	26.18
HORVU7Hr1G082330.2	Barley	mitochondrion, plastid	87.01	23.89
TraesCS7A01G334200.1	Wheat	mitochondrion	79.87	23.84
GSMUA_Achr5P00340_001	Banana	mitochondrion	77.27	23.56
Bra031334.1-P	Field mustard	cytosol	31.82	23.22
CDY58748	Canola	mitochondrion	74.68	23.09
CDY10619	Canola	mitochondrion	74.68	23.0
CDY37389	Canola	mitochondrion	74.68	23.0
Bra031332.1-P	Field mustard	mitochondrion	74.68	23.0
Bra023845.1-P	Field mustard	mitochondrion	74.68	22.95
CDY39506	Canola	mitochondrion	74.68	22.73
Zm00001d026293_P001	Maize	mitochondrion	75.32	22.57
Zm00001d002326_P003	Maize	mitochondrion	75.32	22.39
CDY10622	Canola	golgi	67.53	22.03
Solyc12g006470.1.1	Tomato	extracellular, nucleus	64.94	21.83
KRH24110	Soybean	mitochondrion	72.73	21.83
VIT_03s0017g01760.t01	Wine grape	mitochondrion	74.68	21.82
VIT_03s0017g01720.t01	Wine grape	cytosol, peroxisome, plastid	69.48	21.7
PGSC0003DMT400030683	Potato	mitochondrion	72.08	21.55
AT3G22200.2	Thale cress	mitochondrion	71.43	21.44
Solyc07g043310.2.1	Tomato	nucleus	71.43	21.36
KRH29085	Soybean	cytosol	72.73	21.13
Solyc12g006450.1.1	Tomato	plastid	70.13	20.93
PGSC0003DMT400062372	Potato	plastid	70.13	20.93
CDY10621	Canola	extracellular, plastid	31.82	20.76
PGSC0003DMT400064961	Potato	cytosol	61.69	20.74
Solyc08g014610.2.1	Tomato	cytosol	61.04	20.52
Bra031335.1-P	Field mustard	mitochondrion	66.88	20.52
Zm00001d035443_P001	Maize	plastid	25.97	8.08
Zm00001d033228_P002	Maize	mitochondrion	25.32	7.99
Zm00001d038460_P007	Maize	plasma membrane	24.03	7.89
Zm00001d038453_P003	Maize	mitochondrion	24.03	7.27
Zm00001d027861_P001	Maize	mitochondrion	22.08	7.11
Zm00001d029083_P001	Maize	extracellular	18.18	6.19
Zm00001d038547_P001	Maize	plastid	15.58	5.06
Zm00001d043951_P001	Maize	cytosol	4.55	3.2
Zm00001d019161_P001	Maize	cytosol, mitochondrion, nucleus	0.0	0.0

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:35.1	UniProt:A0A1D6LYD8	ProteinID:AQK84142.1	InterPro:Aminotrans_3
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170
InterPro:IPR015421	InterPro:IPR015422	PFAM:PF00202	PANTHER:PTHR42684	PANTHER:PTHR42684:SF2	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI000843C750	EnsemblPlantsGene:Zm00001d037507	EnsemblPlants:Zm00001d037507_P015
EnsemblPlants:Zm00001d037507_T015	:	:	:	:	:

Description

Gamma-aminobutyrate transaminase POP2 mitochondrial

Coordinates

chr6:+:127630628..127633000

Molecular Weight (calculated)

16699.5 Da

IEP (calculated)

4.944

GRAVY (calculated)

0.088

Length

154 amino acids

Sequence
(BLAST)

001: MVITAFGRLG TMFGCDMYNI KPDLVSIAKA LSSAYMPIGA ILVSPEITDV IYSQSNKLGK SNPIMIRGLG LILGTEFVDN KSPNDPFPAE WGVGSIFGTE
101: CEKRGMLIRV AGDSIMLSPP LIMTPNEVEE IISKFGDALK ATEERIGELK SRKN

Best Arabidopsis Sequence Match ( AT3G22200.1 )
(BLAST)

001: MVVINSLRRL ARTTQVHLHS KYATCMSGNS TSRRIFTTEA APEKKNTVGS KGHDMLAPFT AGWQSADLDP LVIAKSEGSY VYDDTGKKYL DSLAGLWCTA
101: LGGNEPRLVS AAVEQLNTLP FYHSFWNRTT KPSLDLAKVL LEMFTANKMA KAFFTSGGSD ANDTQVKLVW YYNNALGRPE KKKFIARKKS YHGSTLISAS
201: LSGLPPLHQN FDLPAPFVLH TDCPHYWRFH LPGETEEEFS TRLAKNLEDL IIKEGPETIG AFIAEPVMGA GGVIPPPATY FEKVQAVVKK YDILFIADEV
301: ICAFGRLGTM FGCDKYNIKP DLVTLAKALS SAYMPIGAIL MSQEVADVIN SHSSKLGVFS HGFTYSGHPV SCAVAIEALK IYKERNIPEY VAKVAPRFQD
401: GVKAFASGSP IIGETRGTGL ILGTEFVDNK SPNEPFPPEW GVGAFFGAEC QKHGMLVRVA GDGILMSPPL IISPEEIDEL ISIYGKALKA TEEKVKELKA
501: QHKK

Arabidopsis Description

POP2Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:TAIR;Acc:AT3G22200]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.