Factsheet for VIT_03s0017g01720.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
plastid 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0017g01760.t01	Wine grape	mitochondrion	78.7	73.62
Bra031332.1-P	Field mustard	mitochondrion	73.23	72.2
CDY10619	Canola	mitochondrion	73.23	72.2
CDY37389	Canola	mitochondrion	73.23	72.2
CDY58748	Canola	mitochondrion	72.41	71.69
GSMUA_Achr5P00340_001	Banana	mitochondrion	73.43	71.68
CDY10622	Canola	golgi	68.56	71.61
Bra023845.1-P	Field mustard	mitochondrion	72.21	71.06
EES14702	Sorghum	mitochondrion	73.02	70.73
Os08t0205900-01	Rice	mitochondrion	73.02	70.59
CDY39506	Canola	mitochondrion	72.21	70.36
Zm00001d019161_P001	Maize	cytosol, mitochondrion, nucleus	15.21	70.09
Os02t0112900-00	Rice	cytosol	68.56	69.98
TraesCS7D01G341900.2	Wheat	mitochondrion	72.01	69.88
Zm00001d049380_P011	Maize	endoplasmic reticulum, mitochondrion	72.62	69.65
TraesCS7B01G246800.1	Wheat	mitochondrion	71.6	69.49
Zm00001d037507_P015	Maize	cytosol, nucleus, peroxisome	21.7	69.48
AT3G22200.2	Thale cress	mitochondrion	72.01	69.2
Os04t0614600-01	Rice	mitochondrion	72.41	69.19
Os04t0614500-01	Rice	plastid	69.37	68.81
TraesCS7B01G253600.1	Wheat	cytosol, nucleus, peroxisome	67.34	68.59
Zm00001d015445_P008	Maize	cytosol	19.88	68.53
EES11419	Sorghum	mitochondrion	70.99	68.49
Bra031335.1-P	Field mustard	mitochondrion	69.37	68.13
Zm00001d026293_P001	Maize	mitochondrion	70.59	67.7
TraesCS7A01G334200.1	Wheat	mitochondrion	70.39	67.25
Zm00001d002326_P003	Maize	mitochondrion	69.78	66.41
HORVU2Hr1G098880.1	Barley	mitochondrion	68.76	66.34
TraesCS2B01G440400.1	Wheat	golgi	68.76	66.34
TraesCS2A01G421400.1	Wheat	mitochondrion	68.56	66.14
TraesCS2D01G418400.2	Wheat	mitochondrion	68.36	65.95
TraesCS7A01G373400.1	Wheat	plastid	62.68	65.74
HORVU7Hr1G082330.2	Barley	mitochondrion, plastid	71.6	62.92
Zm00001d015444_P003	Maize	mitochondrion	25.76	59.91
Bra031334.1-P	Field mustard	cytosol	22.92	53.55
CDY10621	Canola	extracellular, plastid	24.54	51.27
VIT_09s0002g08670.t01	Wine grape	plastid	25.36	27.0
VIT_19s0027g01790.t01	Wine grape	plastid	23.73	25.05
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	23.94	24.74
VIT_07s0031g01330.t01	Wine grape	mitochondrion	23.12	24.15
VIT_06s0004g07660.t01	Wine grape	mitochondrion	23.33	24.06
VIT_10s0003g03870.t01	Wine grape	mitochondrion	22.11	23.39
VIT_17s0000g00900.t01	Wine grape	plastid	19.68	20.51

Protein Annotations

EntrezGene:100258633	wikigene:100258633	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.2.2.1	InterPro:Aminotrans_3
ProteinID:CBI34103	ProteinID:CBI34103.3	ncoils:Coil	UniProt:D7TUC8	EMBL:FN596248	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008483	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421
InterPro:IPR015422	EntrezGene:LOC100258633	wikigene:LOC100258633	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600
PANTHER:PTHR42684	PANTHER:PTHR42684:SF5	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
UniParc:UPI0001BE414D	ArrayExpress:VIT_03s0017g01720	EnsemblPlantsGene:VIT_03s0017g01720	EnsemblPlants:VIT_03s0017g01720.t01	RefSeq:XP_002269252	RefSeq:XP_002269252.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:-:17886484..17891343

Molecular Weight (calculated)

54195.0 Da

IEP (calculated)

7.614

GRAVY (calculated)

-0.146

Length

493 amino acids

Sequence
(BLAST)

001: MKHLHPAPAL AKCSSTETSL QKEDSATKNA KGFKGHDMLS PFTTGWQSTN LDPLLIERSE GPYVYDSNGR KYLDALAGLW CTALGGSEPR LIAAATAQLN
101: TLPFYHSFWN HASKPSLDLA KELLNTFTAT KMGKVFFTSS GSEANDTQVK LVWYYNNALG RPNKKKFIAL EKSYHGTTFI SASLSGLPVL HQGFDLPSPF
201: VFHTDCPHYW RFHLPGETEE EFSTRLANNL EKLILKQGPE TIAAFIAEPL MGAGGVIPPP TTYYEKIQAI LKKYDILFIA DEVICAFGRL GAMFGCDKYG
301: IKPDLVSIAK AFSSGYMPIG AVLVSPEISE VIHSHSNKLG SFAHGFTFSG HPVSCAVALE VLKIYRERNI IEQVQSLSPR FQDGIRAFSD SPIIGEIRGT
401: GLLIGIEFTD NKSPNDSFPP EWGNRRWGIA GVGAYFGAEC KKHGMIVRSA GNIIVLSPPL IISPEEVEKI ISICEKALKA TEERVKELKS QEK

Best Arabidopsis Sequence Match ( AT3G22200.2 )
(BLAST)

001: MPTIVNKNLI FFQNAKLTWI RMKKVHLHSK YATCMSGNST SRRIFTTEAA PEKKNTVGSK GHDMLAPFTA GWQSADLDPL VIAKSEGSYV YDDTGKKYLD
101: SLAGLWCTAL GGNEPRLVSA AVEQLNTLPF YHSFWNRTTK PSLDLAKVLL EMFTANKMAK AFFTSGGSDA NDTQVKLVWY YNNALGRPEK KKFIARKKSY
201: HGSTLISASL SGLPPLHQNF DLPAPFVLHT DCPHYWRFHL PGETEEEFST RLAKNLEDLI IKEGPETIGA FIAEPVMGAG GVIPPPATYF EKVQAVVKKY
301: DILFIADEVI CAFGRLGTMF GCDKYNIKPD LVTLAKALSS AYMPIGAILM SQEVADVINS HSSKLGVFSH GFTYSGHPVS CAVAIEALKI YKERNIPEYV
401: AKVAPRFQDG VKAFASGSPI IGETRGTGLI LGTEFVDNKS PNEPFPPEWG VGAFFGAECQ KHGMLVRVAG DGILMSPPLI ISPEEIDELI SIYGKALKAT
501: EEKVKELKAQ HKK

Arabidopsis Description

POP2Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Source:TAIR;Acc:AT3G22200]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.