Factsheet for VIT_09s0002g08670.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	61.77	77.93
GSMUA_Achr9P04450_001	Banana	cytosol	67.39	77.81
VIT_19s0027g01790.t01	Wine grape	plastid	75.59	74.95
CDY37615	Canola	mitochondrion	69.11	71.43
CDY67620	Canola	mitochondrion, plastid	69.11	71.43
CDY39963	Canola	mitochondrion	69.55	71.4
Bra008453.1-P	Field mustard	plastid	68.9	71.21
Bra035168.1-P	Field mustard	mitochondrion	69.11	70.95
CDX87325	Canola	mitochondrion	69.11	70.95
GSMUA_Achr5P28220_001	Banana	cytosol	37.15	70.78
AT1G80600.1	Thale cress	plastid	68.9	69.8
Os05t0129100-00	Rice	plastid	48.38	68.71
Os07t0461900-01	Rice	plastid	48.16	67.99
TraesCS1D01G074600.1	Wheat	plastid	64.79	65.22
TraesCS1A01G072200.1	Wheat	plastid	64.36	65.21
TraesCS1B01G090600.1	Wheat	plastid	64.58	65.0
EES17651	Sorghum	plastid	61.99	61.59
HORVU1Hr1G015560.5	Barley	plastid	65.01	58.79
Zm00001d035443_P001	Maize	plastid	60.48	56.57
CDY68670	Canola	cytosol	51.19	53.14
Bra008457.1-P	Field mustard	cytosol, peroxisome, plastid	51.4	48.67
VIT_10s0003g03870.t01	Wine grape	mitochondrion	30.02	29.83
VIT_07s0031g01330.t01	Wine grape	mitochondrion	28.51	27.97
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	28.29	27.46
VIT_06s0004g07660.t01	Wine grape	mitochondrion	28.08	27.2
VIT_03s0017g01720.t01	Wine grape	cytosol, peroxisome, plastid	27.0	25.36
VIT_03s0017g01760.t01	Wine grape	mitochondrion	26.13	22.96
VIT_17s0000g00900.t01	Wine grape	plastid	21.81	21.35

Protein Annotations

EntrezGene:100264460	wikigene:100264460	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.1.1.1.4	InterPro:AcOrn/SuccOrn_fam
InterPro:Aminotrans_3	ProteinID:CCB59695	ProteinID:CCB59695.1	UniProt:F6HXR4	EMBL:FN596494	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006525	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009536
GO:GO:0009570	GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	GO:GO:0042802	InterPro:IPR015421
InterPro:IPR015422	EntrezGene:LOC100264460	wikigene:LOC100264460	HAMAP:MF_01107	PFAM:PF00202	PIRSF:PIRSF000521
ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF79	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	TIGRFAMs:TIGR00707	UniParc:UPI00015CC321	ArrayExpress:VIT_09s0002g08670	EnsemblPlantsGene:VIT_09s0002g08670	EnsemblPlants:VIT_09s0002g08670.t01
unigene:Vvi.17267	RefSeq:XP_002272158	RefSeq:XP_002272158.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:+:9871460..9877545

Molecular Weight (calculated)

49555.8 Da

IEP (calculated)

6.843

GRAVY (calculated)

0.075

Length

463 amino acids

Sequence
(BLAST)

001: MASIQFLLNN TLPSASDLRH SFSGLSGSSN GGRAIACVKV GVQAPGSGDS GKMGFRGASK EVMEAEGRLM VGTYARAPVV ISHGEGCKLY DAEGREYLDM
101: TAGIAVNALG HGDPDWLKAV VEQANTLTHV SNMFYSIPQV ELAERLVSCS FADRVFFSNS GTEANEAAIK FARKFQRFLH PDQKQLATEF ISFSNSFHGR
201: TMGSLALTSK EYYRSPFEPV MPGVTFLEYG NIHAARELIQ SGKIAAVFVE PIQGEGGIYS ATKEFLQSLR SACDDAGSLL VFDEVQCGLG RTGYLWAHES
301: YGIFPDIMTL AKPLAGGLPI GAVLVTERVA SAIKYGDHGS TFAGGPLVCK AAVAVLDKIS KPTFLDSVSK KGQYFKELLM QKLGGNPHVR EVRGLGLIVG
401: IELDVPASPL VDACRNSGLL ILTAGKGNVI RIVPPLIISE EELELAAEIL LKCLPVLDKT KSK

Best Arabidopsis Sequence Match ( AT1G80600.1 )
(BLAST)

001: MASLSQITLP RAPSSEIGLL RRRLERPIIR TRIGFNGRIA SVLTNAGDQA VSVKASVSQK VIEEEAKVIV GTYARAPVVL SSGKGCKLFD PEGKEYLDCA
101: SGIAVNALGH GDPDWLRAVT EQAGVLAHVS NVYYTIPQIE LAKRLVASSF ADRVFFCNSG TEANEAAIKF SRKFQRFTHP EDKEVATGFI AFTNSFHGRT
201: LGALALTSKE QYRTPFEPIM PGVTFLEYGN IQAATDLIRS GKIAAVFVEP IQGEGGIYSA TKEFLQSLRS ACDAAGSLLV FDEVQCGLGR TGLMWAYEAF
301: GVTPDIMTVA KPLAGGLPIG AVLVTEKVAE TINYGDHGST FAGSPLVCSA AIAVMDKVSK PSFLSSVSNK GRYFRDLLVK KLGGNSHVKE VRGEGLIIGV
401: ELDVPASSLV DACRDSGLLI LTAGKGNVVR IVPPLVISEE EIERAVEIMS QNLTALD

Arabidopsis Description

WIN1Acetylornithine aminotransferase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.