Factsheet for VIT_07s0031g01330.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	peroxisome	76.27	85.31
CDX90347	Canola	mitochondrion	82.84	82.14
CDY63451	Canola	mitochondrion	82.42	81.72
PGSC0003DMT400033328	Potato	extracellular	81.36	81.18
AT4G39660.1	Thale cress	mitochondrion	81.78	81.09
KRH43286	Soybean	mitochondrion	81.36	80.84
Solyc04g054310.2.1	Tomato	extracellular, plastid	80.93	80.76
Bra011843.1-P	Field mustard	mitochondrion	80.93	80.25
CDY41995	Canola	mitochondrion	80.93	80.25
KRH31231	Soybean	mitochondrion	80.3	80.13
CDY42643	Canola	mitochondrion	80.72	80.04
KRH59427	Soybean	mitochondrion	80.51	79.66
KXG40078	Sorghum	mitochondrion	77.54	76.41
TraesCS4A01G015900.1	Wheat	mitochondrion	77.12	75.99
HORVU4Hr1G075360.5	Barley	mitochondrion	76.91	75.78
Zm00001d027861_P001	Maize	mitochondrion	76.69	75.73
TraesCS4D01G286900.1	Wheat	mitochondrion	76.69	75.57
Os03t0171900-01	Rice	mitochondrion	77.54	75.31
TraesCS4B01G288100.1	Wheat	mitochondrion	76.27	75.16
KRG97644	Soybean	mitochondrion	59.75	72.49
VIT_08s0058g00930.t01	Wine grape	mitochondrion, peroxisome	62.29	61.64
VIT_06s0004g07660.t01	Wine grape	mitochondrion	61.44	60.67
Bra010671.1-P	Field mustard	mitochondrion	80.51	43.18
VIT_09s0002g08670.t01	Wine grape	plastid	27.97	28.51
VIT_19s0027g01790.t01	Wine grape	plastid	27.75	28.05
VIT_10s0003g03870.t01	Wine grape	mitochondrion	23.94	24.25
VIT_03s0017g01720.t01	Wine grape	cytosol, peroxisome, plastid	24.15	23.12
VIT_03s0017g01760.t01	Wine grape	mitochondrion	24.79	22.2
VIT_17s0000g00900.t01	Wine grape	plastid	22.03	21.99

Protein Annotations

EntrezGene:100243935	wikigene:100243935	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	EMBL:AM488698
InterPro:Aminotrans_3	ProteinID:CAN62274	ProteinID:CAN62274.1	ProteinID:CBI21483	ProteinID:CBI21483.3	UniProt:D7SW34
EMBL:FN595233	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005773	GO:GO:0005774
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0008453	GO:GO:0008483	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019544	GO:GO:0030170	GO:GO:0042802
GO:GO:0046686	InterPro:IPR015421	InterPro:IPR015422	EntrezGene:LOC100243935	wikigene:LOC100243935	PFAM:PF00202
PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI00015C9A97	ArrayExpress:VIT_07s0031g01330	EnsemblPlantsGene:VIT_07s0031g01330	EnsemblPlants:VIT_07s0031g01330.t01
unigene:Vvi.17534	RefSeq:XP_002276566	RefSeq:XP_002276566.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:-:17412029..17416163

Molecular Weight (calculated)

51325.0 Da

IEP (calculated)

8.345

GRAVY (calculated)

-0.063

Length

472 amino acids

Sequence
(BLAST)

001: MAFRRALIST ALKRSKSDLH LHRRWLSGGA VSAPPVLPAF DHQPKPYTGP LADEVLQKRK KFLGSSLFYY YQKPVNVVEG KMQYLFDENG KRYLDAFAGI
101: VTVSCGHCHP EILNAIIEQS KLLQHATTIY LHHAIADFAE ALASKMPGNL KVVYFVNSGS EANELAMLMA RLYSGNLGMI SLRNAYHGGS SGTIGLTALN
201: TWKYSIPEGE IHHVVNPDPY RGIFGSDASS YARDLKDHID YGTSGKVAGF ISETIQGVGG AVELAPGYLK LVYDIVRKAG GVCIADEVQT GFGRTGSHYW
301: GFETQGVIPD IVTMAKGIGN GLPLGAVVTT PEIADVLAQK IQFNTFGGNP VCSAGGLAVL RVLDKEKRQE HCADVGSHLI ERLRALQQKH DIIGDVRGRG
401: LMVGVELVTD RKEKTPAKAE TAVLFENLRE IGILIGKGGL HGNVFRIKPP MCFTKDDADF LVDALDYSIS KL

Best Arabidopsis Sequence Match ( AT4G39660.1 )
(BLAST)

001: MALQRQLLKR ATSDIYHRRA ISLLRTDFST SPSIADAPPH IPPFVHQPRP YKGPSADEVL QKRKKFLGPS LFHYYQKPLN IVEGKMQYLY DESGRRYLDA
101: FAGIVTVSCG HCHPDILNAI TEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSLYAKDVH DHIEYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYEIV RNAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LASKILFNTF GGNPVCSAGG LAVLNVIDKE KRQEHCAEVG SHLIQRLKDV QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETSVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Arabidopsis Description

AGT2Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940M2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.