Factsheet for Zm00001d027861_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG40078	Sorghum	mitochondrion	95.82	95.62
TraesCS4D01G286900.1	Wheat	mitochondrion	88.91	88.73
HORVU4Hr1G075360.5	Barley	mitochondrion	88.91	88.73
TraesCS4A01G015900.1	Wheat	mitochondrion	88.7	88.52
TraesCS4B01G288100.1	Wheat	mitochondrion	88.7	88.52
GSMUA_Achr10P...	Banana	peroxisome	76.15	86.26
Os03t0171900-01	Rice	mitochondrion	87.66	86.21
PGSC0003DMT400033328	Potato	extracellular	76.36	77.17
VIT_07s0031g01330.t01	Wine grape	mitochondrion	75.73	76.69
CDX90347	Canola	mitochondrion	75.94	76.26
Solyc04g054310.2.1	Tomato	extracellular, plastid	75.31	76.11
KRH43286	Soybean	mitochondrion	75.52	76.0
CDY63451	Canola	mitochondrion	75.52	75.84
CDY42643	Canola	mitochondrion	74.9	75.21
CDY41995	Canola	mitochondrion	74.9	75.21
Bra011843.1-P	Field mustard	mitochondrion	74.9	75.21
AT4G39660.1	Thale cress	mitochondrion	74.9	75.21
KRH59427	Soybean	mitochondrion	74.9	75.05
KRH31231	Soybean	mitochondrion	73.01	73.78
KRG97644	Soybean	mitochondrion	56.28	69.15
Zm00001d038460_P007	Maize	plasma membrane	59.83	60.98
Zm00001d029083_P001	Maize	extracellular	56.49	59.73
Zm00001d038453_P003	Maize	mitochondrion	60.46	56.78
Zm00001d043951_P001	Maize	cytosol	21.76	47.49
Bra010671.1-P	Field mustard	mitochondrion	74.27	40.34
Zm00001d019161_P001	Maize	cytosol, mitochondrion, nucleus	6.07	27.1
Zm00001d035443_P001	Maize	plastid	25.31	24.44
Zm00001d033228_P002	Maize	mitochondrion	24.27	23.77
Zm00001d002326_P003	Maize	mitochondrion	25.1	23.17
Zm00001d026293_P001	Maize	mitochondrion	24.27	22.57
Zm00001d037507_P015	Maize	cytosol, nucleus, peroxisome	7.11	22.08
Zm00001d038547_P001	Maize	plastid	21.76	21.94
Zm00001d015444_P003	Maize	mitochondrion	9.62	21.7
Zm00001d049380_P011	Maize	endoplasmic reticulum, mitochondrion	22.59	21.01
Zm00001d015445_P008	Maize	cytosol	6.28	20.98

Protein Annotations

EntrezGene:103631778	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	UniProt:A0A1D6JQ63	InterPro:Aminotrans_3
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005773	GO:GO:0005774	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0008453	GO:GO:0008483	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016740	GO:GO:0019544	GO:GO:0030170	GO:GO:0046686	InterPro:IPR015421	InterPro:IPR015422
ProteinID:ONL94129.1	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986	PANTHER:PTHR11986:SF77
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0002214249	EnsemblPlantsGene:Zm00001d027861
EnsemblPlants:Zm00001d027861_P001	EnsemblPlants:Zm00001d027861_T001	SEG:seg	:	:	:

Description

Alanine--glyoxylate aminotransferase 2 homolog 1 mitochondrial

Coordinates

chr1:+:15582763..15585986

Molecular Weight (calculated)

52017.9 Da

IEP (calculated)

8.369

GRAVY (calculated)

-0.133

Length

478 amino acids

Sequence
(BLAST)

001: MAASLLRRGA VTSRRRCPVE MLRRLVSSEA AADRAPSRPP PEMPPFDYRP RPYAGLGGAE IFEKRKAVLG PSLFHYYQKP LNIVEGKMQY LYDEHGKRYL
101: DCFGGIVTVS CGHCHPDIVN AVVEQTKLLQ HTTTIYLHHT IVEFAEALTS KMPGNLKVAY FVNSGTEANE LAMLMARLYS GNLSMVALRN AYHGGSAGTI
201: GLTGMQTWKY PIPQGEIHHV MNPDPYRGTF GSDAAAYAKE VEEHITYGSS GRVAGFIAET FQGVGGAVEL APGYLKLAYD IVRKAGGVCI ADEVQSGFGR
301: TGSHYWGFQT QGVIPDIVTM AKGIGNGLPL GAVVTTPEIA SVLAQKIQFN TFGGNPVCSA GGLAVLKVLD KEKRQAHCAD VGSHLLERLK SLQEKHEIIG
401: DVRGRGLMLG VELVTDRKEK TPAKSETIEL FEKLRDLGVL VGKGGLHGNV FRIKPPMCFS KDDADFLVDS MDYAMSRL

Best Arabidopsis Sequence Match ( AT4G39660.1 )
(BLAST)

001: MALQRQLLKR ATSDIYHRRA ISLLRTDFST SPSIADAPPH IPPFVHQPRP YKGPSADEVL QKRKKFLGPS LFHYYQKPLN IVEGKMQYLY DESGRRYLDA
101: FAGIVTVSCG HCHPDILNAI TEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSLYAKDVH DHIEYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYEIV RNAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LASKILFNTF GGNPVCSAGG LAVLNVIDKE KRQEHCAEVG SHLIQRLKDV QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETSVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Arabidopsis Description

AGT2Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940M2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.