CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027861_P001	Maize	mitochondrion	95.62	95.82
TraesCS4D01G286900.1	Wheat	mitochondrion	90.4	90.4
HORVU4Hr1G075360.5	Barley	mitochondrion	90.19	90.19
TraesCS4A01G015900.1	Wheat	mitochondrion	90.19	90.19
TraesCS4B01G288100.1	Wheat	mitochondrion	89.77	89.77
Os03t0171900-01	Rice	mitochondrion	88.73	87.45
GSMUA_Achr10P...	Banana	peroxisome	76.62	86.97
VIT_07s0031g01330.t01	Wine grape	mitochondrion	76.41	77.54
PGSC0003DMT400033328	Potato	extracellular	76.41	77.38
Solyc04g054310.2.1	Tomato	extracellular, plastid	75.37	76.32
CDX90347	Canola	mitochondrion	75.78	76.26
KRH43286	Soybean	mitochondrion	75.37	76.0
CDY63451	Canola	mitochondrion	75.37	75.84
AT4G39660.1	Thale cress	mitochondrion	75.16	75.63
KRH59427	Soybean	mitochondrion	74.53	74.84
CDY42643	Canola	mitochondrion	74.11	74.58
Bra011843.1-P	Field mustard	mitochondrion	74.11	74.58
CDY41995	Canola	mitochondrion	74.11	74.58
KRH31231	Soybean	mitochondrion	72.65	73.57
KRG97644	Soybean	mitochondrion	55.95	68.89
EER94889	Sorghum	mitochondrion	61.38	63.23
EES19688	Sorghum	mitochondrion	61.38	61.38
Bra010671.1-P	Field mustard	mitochondrion	74.32	40.45
EES17651	Sorghum	plastid	25.05	25.75
EER91172	Sorghum	mitochondrion	23.8	24.31
EES11419	Sorghum	mitochondrion	24.43	22.9
EES14702	Sorghum	mitochondrion	23.59	22.2
KXG22248	Sorghum	plastid	21.5	21.78

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:6.2.4.6	UniProt:A0A1B6QQ80	InterPro:Aminotrans_3	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005773	GO:GO:0005774	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0008453	GO:GO:0008483	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0019544	GO:GO:0030170	GO:GO:0046686	InterPro:IPR015421	InterPro:IPR015422	EnsemblPlants:KXG40078
ProteinID:KXG40078	ProteinID:KXG40078.1	PFAM:PF00202	PIRSF:PIRSF000521	ScanProsite:PS00600	PANTHER:PTHR11986
PANTHER:PTHR11986:SF77	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	EnsemblPlantsGene:SORBI_3001G488200	SUPFAM:SSF53383
UniParc:UPI0003C6486F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:75805047..75808746

Molecular Weight (calculated)

51785.6 Da

IEP (calculated)

8.158

GRAVY (calculated)

-0.124

Length

479 amino acids

Sequence
(BLAST)

001: MAASLLRRGA VASRRRCPEG MLRRLVSSEA APERAPSSRP PPEMPSFDHQ PRPYAGMGGA EIFQKRKAVL GPSLFHYYQK PLNIVEGKMQ YLYDENGKRY
101: LDCFGGIVTV SCGHCHPDIV NAVVEQTKLL QHTTTIYLHH AIVEFAEALT SKMPGNLKVA YFVNSGTEAN ELAMLMARLY SGNLSMVALR NAYHGGSAGT
201: IGLTGLQTWK YPIPQGEIHH VMNPDPYRGT FGSDAAAYAK EVEEHITYGS SGRVAGFIAE TFQGVGGAVE LAPGYLKLAY DIVRKAGGVC IADEVQSGFG
301: RTGSHYWGFQ TQGVIPDIVT MAKGIGNGLP LGAVVTTPEI ASVLAQKIQF NTFGGNPVCS AGGLAVLKVL DKEKRQAHCA DVGAHLVERL KSLQEKHEII
401: GDVRGRGLML GVELVTDRKE KTPAKAETTE LFEKLKDLGV LVGKGGLHGN VFRIKPPMCF SKDDADFLVD CMDYAMSGL

Best Arabidopsis Sequence Match ( AT4G39660.1 )
(BLAST)

001: MALQRQLLKR ATSDIYHRRA ISLLRTDFST SPSIADAPPH IPPFVHQPRP YKGPSADEVL QKRKKFLGPS LFHYYQKPLN IVEGKMQYLY DESGRRYLDA
101: FAGIVTVSCG HCHPDILNAI TEQSKLLQHA TTIYLHHAIG DFAEALAAKM PGNLKVVYFV NSGSEANELA MMMARLYTGS LEMISLRNAY HGGSSNTIGL
201: TALNTWKYPL PQGEIHHVVN PDPYRGVFGS DGSLYAKDVH DHIEYGTSGK VAGFIAETIQ GVGGAVELAP GYLKSVYEIV RNAGGVCIAD EVQTGFGRTG
301: SHYWGFQTQD VVPDIVTMAK GIGNGLPLGA VVTTPEIASV LASKILFNTF GGNPVCSAGG LAVLNVIDKE KRQEHCAEVG SHLIQRLKDV QKRHDIIGDV
401: RGRGLMVGIE LVSDRKDKTP AKAETSVLFE QLRELGILVG KGGLHGNVFR IKPPMCFTKD DADFLVDALD YSISRL

Arabidopsis Description

AGT2Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940M2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.